| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is hisB
Identifier: 51595896
GI number: 51595896
Start: 1876684
End: 1877751
Strand: Reverse
Name: hisB
Synonym: YPTB1559
Alternate gene names: 51595896
Gene position: 1877751-1876684 (Counterclockwise)
Preceding gene: 51595897
Following gene: 51595895
Centisome position: 39.58
GC content: 51.12
Gene sequence:
>1068_bases ATGAGCCAGAAATTTCTTTTTATTGACCGCGACGGCACCATCATTGCCGAGCCACCAACTGATTATCAGGTTGACCGGTT GGATAAACTGGCGCTGGAGCCTGATGTCATTCCCGCATTGCTGGCGTTGCAAAAAGCAGACTACAAACTGGTGATGATCA CTAATCAGGATGGCCTCGGCACCAGCAGTTTCCCGCAGGAAACCTTCGATCCGCCACATAACCTGATGATGCAAATCCTG ACGTCTCAGGGGATCAATTTTGAACAGATACTGATTTGCCCACATCTGCCAGAGGATAACTGCACCTGTCGCAAACCGAA AACCGCGCTGGTAGAAAGCTATCTGGCAGACGGCGTGATGAACAGTGCCACTAGCTATGTCATCGGTGACCGTGAAACTG ACCTACAACTGGCCGAGAACATGGGTATCAGCGGATTACGTTATCAGCGTGATGGCTTGAACTGGACGCAAATTGCCAAA CAACTGACCCAGCGCGACCGCCACGCCTATGTTAATCGCGTGACCAAAGAAACCGCCATTGACGTTAATGTTTGGCTGGA TCGCGAAGGGGGAAGCAAAATTAAAACCGGCGTGGGCTTCTTCGACCATATGCTGGATCAAATCGCCACCCACGGCGGTT TTCGCATGGATATTCAGGTCAGCGGCGATCTGTATATCGATGATCACCACACAGTGGAAGATACCGCGCTGGCACTGGGC GAAGCGATCAACATCGCACTGGGTGACAAACGGGGTATTGGCCGCTTTGGTTTTGTATTGCCGATGGATGAGTGCCTGGC ACGCTGTGCCTTGGATATTTCTGGTCGCCCGCATTTGGAATACAAAGCTGAATTTAACTACCAGCGTGTCGGCGATCTAA GCACCGAGATGGTCGAGCACTTCTTCCGCTCCCTTTCGTATGCCATGGCCTGTACCTTGCACCTGAAAACCAAAGGTCGC AACGATCATCACCGAGTAGAAAGCCTGTTTAAAGTATTTGGTCGTACCTTGCGTCAAGCCATTCGCGTTGAAGGCAATAC CCTGCCAAGTTCAAAAGGAGTGCTGTAA
Upstream 100 bases:
>100_bases TTGCCGCCCTTGCCCCCCTGCCCGGCATTGATAACTCGAATAACATTGATAACCAGAGTAAAACCCATTCTCAGACCTCC AGCATCCGTAAGGGAACGAT
Downstream 100 bases:
>100_bases TGGATGTGGTGATCCTGGATACCGGTTGTGCCAATCTCTCCTCTGTCACCTATGCGGTACAGCGTTTGGGTTATACACCG GTTATCAGCCGCGACCCGGC
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQKFLFIDRDGTIIAEPPTDYQVDRLDKLALEPDVIPALLALQKADYKLVMITNQDGLGTSSFPQETFDPPHNLMMQIL TSQGINFEQILICPHLPEDNCTCRKPKTALVESYLADGVMNSATSYVIGDRETDLQLAENMGISGLRYQRDGLNWTQIAK QLTQRDRHAYVNRVTKETAIDVNVWLDREGGSKIKTGVGFFDHMLDQIATHGGFRMDIQVSGDLYIDDHHTVEDTALALG EAINIALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAEFNYQRVGDLSTEMVEHFFRSLSYAMACTLHLKTKGR NDHHRVESLFKVFGRTLRQAIRVEGNTLPSSKGVL
Sequences:
>Translated_355_residues MSQKFLFIDRDGTIIAEPPTDYQVDRLDKLALEPDVIPALLALQKADYKLVMITNQDGLGTSSFPQETFDPPHNLMMQIL TSQGINFEQILICPHLPEDNCTCRKPKTALVESYLADGVMNSATSYVIGDRETDLQLAENMGISGLRYQRDGLNWTQIAK QLTQRDRHAYVNRVTKETAIDVNVWLDREGGSKIKTGVGFFDHMLDQIATHGGFRMDIQVSGDLYIDDHHTVEDTALALG EAINIALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAEFNYQRVGDLSTEMVEHFFRSLSYAMACTLHLKTKGR NDHHRVESLFKVFGRTLRQAIRVEGNTLPSSKGVL >Mature_354_residues SQKFLFIDRDGTIIAEPPTDYQVDRLDKLALEPDVIPALLALQKADYKLVMITNQDGLGTSSFPQETFDPPHNLMMQILT SQGINFEQILICPHLPEDNCTCRKPKTALVESYLADGVMNSATSYVIGDRETDLQLAENMGISGLRYQRDGLNWTQIAKQ LTQRDRHAYVNRVTKETAIDVNVWLDREGGSKIKTGVGFFDHMLDQIATHGGFRMDIQVSGDLYIDDHHTVEDTALALGE AINIALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAEFNYQRVGDLSTEMVEHFFRSLSYAMACTLHLKTKGRN DHHRVESLFKVFGRTLRQAIRVEGNTLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=81.4084507042254, Blast_Score=613, Evalue=1e-177, Organism=Escherichia coli, GI1786399, Length=150, Percent_Identity=30, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324776, Length=217, Percent_Identity=39.1705069124424, Blast_Score=156, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 39893; Mature: 39762
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKFLFIDRDGTIIAEPPTDYQVDRLDKLALEPDVIPALLALQKADYKLVMITNQDGLG CCCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCC TSSFPQETFDPPHNLMMQILTSQGINFEQILICPHLPEDNCTCRKPKTALVESYLADGVM CCCCCHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH NSATSYVIGDRETDLQLAENMGISGLRYQRDGLNWTQIAKQLTQRDRHAYVNRVTKETAI HCCCEEEECCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE DVNVWLDREGGSKIKTGVGFFDHMLDQIATHGGFRMDIQVSGDLYIDDHHTVEDTALALG EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCHHHHHHHHH EAINIALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAEFNYQRVGDLSTEMVEH HHEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCHHHHHHHH FFRSLSYAMACTLHLKTKGRNDHHRVESLFKVFGRTLRQAIRVEGNTLPSSKGVL HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SQKFLFIDRDGTIIAEPPTDYQVDRLDKLALEPDVIPALLALQKADYKLVMITNQDGLG CCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCC TSSFPQETFDPPHNLMMQILTSQGINFEQILICPHLPEDNCTCRKPKTALVESYLADGVM CCCCCHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH NSATSYVIGDRETDLQLAENMGISGLRYQRDGLNWTQIAKQLTQRDRHAYVNRVTKETAI HCCCEEEECCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE DVNVWLDREGGSKIKTGVGFFDHMLDQIATHGGFRMDIQVSGDLYIDDHHTVEDTALALG EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCHHHHHHHHH EAINIALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAEFNYQRVGDLSTEMVEH HHEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCHHHHHHHH FFRSLSYAMACTLHLKTKGRNDHHRVESLFKVFGRTLRQAIRVEGNTLPSSKGVL HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]