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The map label for this gene is yohJ

Identifier: 51595866

GI number: 51595866

Start: 1838514

End: 1838921

Strand: Reverse

Name: yohJ

Synonym: YPTB1529

Alternate gene names: 51595866

Gene position: 1838921-1838514 (Counterclockwise)

Preceding gene: 51595867

Following gene: 51595865

Centisome position: 38.76

GC content: 47.3

Gene sequence:

>408_bases
ATGCGTAATATGATGTCACTTTGCTGGCAGTACCTGCGAGCTTTCACCATTATTTACCTGTGCTTATGGGCAGGGAAAGC
TCTGGCCTTACTTCTGCCGATTGTCATCCCCGGCAGTATCATCGGCATGTTGATTCTGTTCGTCTTACTCACCTTGCAGA
TTTTACCCTCACCTTGGGTAAAACCAAGCTGCCAGTTACTGATCCGCTATATGGCGCTACTGTTTGTGCCGATAGGCGTC
GGAGTCATGCAATATTACGAACAGCTCACTAAACAGTTCGGTCCGATCGTGGTTTCCTGCTTTATCAGTACCTTAATTGT
TATGTTAGTGGTGGCCTATAGCTCACATTATGTCCACCGTGACCGCAAAGTCATTAGCCCTTCAACACCGACTGAGGGGG
AAAAATGA

Upstream 100 bases:

>100_bases
GAGTGTCATTGCATCATTAATGCTATTCATAGTGTGATGGGTAGCACAGAACAAAAGTTAATTGTATGATGATTGTGTTA
AGTCACCCAGGACAATATCT

Downstream 100 bases:

>100_bases
TCAGCAATCTATGGTGGTCACTGCCGTTAACCTTAATGGTGTTCTTTGGTGCACGCCAGCTATCCCGTTGGGCGAAAATC
CCCCTACTAAATCCACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRNMMSLCWQYLRAFTIIYLCLWAGKALALLLPIVIPGSIIGMLILFVLLTLQILPSPWVKPSCQLLIRYMALLFVPIGV
GVMQYYEQLTKQFGPIVVSCFISTLIVMLVVAYSSHYVHRDRKVISPSTPTEGEK

Sequences:

>Translated_135_residues
MRNMMSLCWQYLRAFTIIYLCLWAGKALALLLPIVIPGSIIGMLILFVLLTLQILPSPWVKPSCQLLIRYMALLFVPIGV
GVMQYYEQLTKQFGPIVVSCFISTLIVMLVVAYSSHYVHRDRKVISPSTPTEGEK
>Mature_135_residues
MRNMMSLCWQYLRAFTIIYLCLWAGKALALLLPIVIPGSIIGMLILFVLLTLQILPSPWVKPSCQLLIRYMALLFVPIGV
GVMQYYEQLTKQFGPIVVSCFISTLIVMLVVAYSSHYVHRDRKVISPSTPTEGEK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family

Homologues:

Organism=Escherichia coli, GI1788463, Length=132, Percent_Identity=64.3939393939394, Blast_Score=174, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1460_YERPP (A4TKN5)

Other databases:

- EMBL:   CP000668
- RefSeq:   YP_001162820.1
- ProteinModelPortal:   A4TKN5
- STRING:   A4TKN5
- GeneID:   5064118
- GenomeReviews:   CP000668_GR
- KEGG:   ypp:YPDSF_1460
- eggNOG:   COG1380
- HOGENOM:   HBG697118
- OMA:   GVMNYYD
- ProtClustDB:   PRK01821
- BioCyc:   YPES386656:YPDSF_1460-MONOMER
- HAMAP:   MF_01144
- InterPro:   IPR005538
- InterPro:   IPR022957

Pfam domain/function: PF03788 LrgA

EC number: NA

Molecular weight: Translated: 15294; Mature: 15294

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a874dac)-; HASH(0x1abaef94)-; HASH(0x180e6c54)-;

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMMSLCWQYLRAFTIIYLCLWAGKALALLLPIVIPGSIIGMLILFVLLTLQILPSPWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KPSCQLLIRYMALLFVPIGVGVMQYYEQLTKQFGPIVVSCFISTLIVMLVVAYSSHYVHR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRKVISPSTPTEGEK
CCCCCCCCCCCCCCH
>Mature Secondary Structure
MRNMMSLCWQYLRAFTIIYLCLWAGKALALLLPIVIPGSIIGMLILFVLLTLQILPSPWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KPSCQLLIRYMALLFVPIGVGVMQYYEQLTKQFGPIVVSCFISTLIVMLVVAYSSHYVHR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRKVISPSTPTEGEK
CCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA