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The map label for this gene is yohK

Identifier: 51595865

GI number: 51595865

Start: 1837822

End: 1838517

Strand: Reverse

Name: yohK

Synonym: YPTB1528

Alternate gene names: 51595865

Gene position: 1838517-1837822 (Counterclockwise)

Preceding gene: 51595866

Following gene: 51595864

Centisome position: 38.75

GC content: 48.28

Gene sequence:

>696_bases
ATGATCAGCAATCTATGGTGGTCACTGCCGTTAACCTTAATGGTGTTCTTTGGTGCACGCCAGCTATCCCGTTGGGCGAA
AATCCCCCTACTAAATCCACTATTGATATCAATGGTCGTTATTATTCCATTGCTATTAGTCACGCATATGCCTTACGCCA
ACTATTTTGCTGGTAGTAAAATTCTGAATGACTTGCTACAACCCGCGGTCGTGGCGCTCGCTTTTCCACTGTATGAGCAG
CTACATCAGATCCGCGCCAGTTGGAAATCAATTATTGCCATTTGCTTTATTGGCAGTATCACTGCCATGGTCAGCGGTAC
AGCGATAGCCCTGTGGATGGGGGCAACGCCAGAAATTGCGGCGTCCATATTACCTAAATCCGTAACGACACCGATTGCGA
TGGCAGTGGCAGAGTCTCTTCATGGTTTACCCGCTATTAGCGCAGTTTGCGTTATTTTTGCCGGTATTTTAGGGGCGGTG
TTTGGCCACAGTTTGCTGAATTTATTAAAAATCACCACCAAAGCATCCCGTGGATTGGCGATGGGGACGGCGTCTCATGC
CTTAGGGACCGCCCGTTGCGCCGAACTAGATTTTAAAGAGGGTGCGTTCAGCTCTTTAGCCCTAGTCATTTGCGGGATTA
TCACCTCACTACTGGCTCCGTTCCTGTTCCCGGTCCTATTACATTTGTTTGGTTGA

Upstream 100 bases:

>100_bases
TCAGTACCTTAATTGTTATGTTAGTGGTGGCCTATAGCTCACATTATGTCCACCGTGACCGCAAAGTCATTAGCCCTTCA
ACACCGACTGAGGGGGAAAA

Downstream 100 bases:

>100_bases
ACCCACTTTCCCCTGGCGTGATAGCGACGTCAGGGTCTGTAATCCTTATCAGACCTTATCAGAGCCGCCAATTATCGTTA
AGGTCTAAGCTGTAGTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MISNLWWSLPLTLMVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGTARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG

Sequences:

>Translated_231_residues
MISNLWWSLPLTLMVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGTARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
>Mature_231_residues
MISNLWWSLPLTLMVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGTARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=231, Percent_Identity=76.1904761904762, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24607; Mature: 24607

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNLWWSLPLTLMVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ILNDLLQPAVVALAFPLYEQLHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHH
ASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAVFGHSLLNLLKITTKASRGLA
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
MGTASHALGTARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
HCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MISNLWWSLPLTLMVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ILNDLLQPAVVALAFPLYEQLHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHH
ASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAVFGHSLLNLLKITTKASRGLA
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
MGTASHALGTARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
HCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]