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The map label for this gene is yafV

Identifier: 51595222

GI number: 51595222

Start: 1047598

End: 1048368

Strand: Reverse

Name: yafV

Synonym: YPTB0872

Alternate gene names: 51595222

Gene position: 1048368-1047598 (Counterclockwise)

Preceding gene: 51595223

Following gene: 51595213

Centisome position: 22.1

GC content: 52.01

Gene sequence:

>771_bases
ATGTCAACTTTAAAACTGACGTTATTGCAACAGCCGCTGGTCTGGTTGGATGCACCCGCTAACTTTCGCCATTTTGAGAC
GCTACTTGCGCCGTTATCGTCGCGTGATGTGATTGTGTTACCGGAAATGTTTACGACCGGTTTTGCCATGAATGCCGCTG
AGCATGCACCGCCAGAAGCGGAAGTTAGCGCGTGGTTAGTGCATTGGGCCACCCACACCAATGCGCTGATTGGCGGCAGT
GTGGCTCTGATGACACCAGAAGGCGCGGTTAACCGTTTCCTGTTAGCGGAACCAGGTGGGCGTATCCATCATTATGATAA
ACGCCATTTATTCCGCATGGCCGGTGAACACCATCACTATCAGGCAGGCTCTGAGCGTAAAGTCGTGGAGTGGCGCGGCT
GGCGAATTTTCCCTCAAATCTGTTATGACCTGCGCTTTCCGGTCTGGTCACGGAATCAGCAAGATTATGATTTAGCGCTG
TATGTGGCTAACTGGCCGACCAAGCGAACTCAACACTGGCAAACATTATTGGCCGCTCGCGCCATTGAAAATCAGGCTTA
TGTCGCCGGTTGTAACCGGGTTGGTGATGATGATAACGGCCATCATTATCAGGGCAATAGTCTGATTTTGGATGCGCAAG
GTGAAGTTTTGGCCCAGGCCGCACCGGGGCAGGCGGCACAATTAGAAGCTGAATTGTCTTTAGAGGCGTTGCAGCATTAT
CGTGAGGGGTTTCCTGCCTGGCGCGATGCCGACCCTTTTAAGCTGTTATAA

Upstream 100 bases:

>100_bases
TACCGTTATCGGTATTTTGTGAAGCTCCGTTCCCCCATAAATTGATCCGGCTGTGCTTCGCCAAACAAGATGCCACGCTG
GACGCCGCCGCAGAGAGATT

Downstream 100 bases:

>100_bases
CGCCCCCTACGCGCCGGTACCTTTGGGGGGAGCCTCAGGGATGAGGCTCATTAGTCCTGATGAGCTGACATCAGTCAGTG
ATTCAGGCGAGTGAGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSTLKLTLLQQPLVWLDAPANFRHFETLLAPLSSRDVIVLPEMFTTGFAMNAAEHAPPEAEVSAWLVHWATHTNALIGGS
VALMTPEGAVNRFLLAEPGGRIHHYDKRHLFRMAGEHHHYQAGSERKVVEWRGWRIFPQICYDLRFPVWSRNQQDYDLAL
YVANWPTKRTQHWQTLLAARAIENQAYVAGCNRVGDDDNGHHYQGNSLILDAQGEVLAQAAPGQAAQLEAELSLEALQHY
REGFPAWRDADPFKLL

Sequences:

>Translated_256_residues
MSTLKLTLLQQPLVWLDAPANFRHFETLLAPLSSRDVIVLPEMFTTGFAMNAAEHAPPEAEVSAWLVHWATHTNALIGGS
VALMTPEGAVNRFLLAEPGGRIHHYDKRHLFRMAGEHHHYQAGSERKVVEWRGWRIFPQICYDLRFPVWSRNQQDYDLAL
YVANWPTKRTQHWQTLLAARAIENQAYVAGCNRVGDDDNGHHYQGNSLILDAQGEVLAQAAPGQAAQLEAELSLEALQHY
REGFPAWRDADPFKLL
>Mature_255_residues
STLKLTLLQQPLVWLDAPANFRHFETLLAPLSSRDVIVLPEMFTTGFAMNAAEHAPPEAEVSAWLVHWATHTNALIGGSV
ALMTPEGAVNRFLLAEPGGRIHHYDKRHLFRMAGEHHHYQAGSERKVVEWRGWRIFPQICYDLRFPVWSRNQQDYDLALY
VANWPTKRTQHWQTLLAARAIENQAYVAGCNRVGDDDNGHHYQGNSLILDAQGEVLAQAAPGQAAQLEAELSLEALQHYR
EGFPAWRDADPFKLL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=255, Percent_Identity=65.4901960784314, Blast_Score=357, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17556280, Length=164, Percent_Identity=32.3170731707317, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323383, Length=269, Percent_Identity=23.4200743494424, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 28992; Mature: 28861

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKLTLLQQPLVWLDAPANFRHFETLLAPLSSRDVIVLPEMFTTGFAMNAAEHAPPEA
CCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCEEEECHHHHCCEECCCHHCCCCCH
EVSAWLVHWATHTNALIGGSVALMTPEGAVNRFLLAEPGGRIHHYDKRHLFRMAGEHHHY
HHEEEEEEEHHCCCEEECCEEEEECCCCHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCC
QAGSERKVVEWRGWRIFPQICYDLRFPVWSRNQQDYDLALYVANWPTKRTQHWQTLLAAR
CCCCCCEEEEECCCEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
AIENQAYVAGCNRVGDDDNGHHYQGNSLILDAQGEVLAQAAPGQAAQLEAELSLEALQHY
HHCCCEEEEECCCCCCCCCCCEEECCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
REGFPAWRDADPFKLL
HHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STLKLTLLQQPLVWLDAPANFRHFETLLAPLSSRDVIVLPEMFTTGFAMNAAEHAPPEA
CCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCEEEECHHHHCCEECCCHHCCCCCH
EVSAWLVHWATHTNALIGGSVALMTPEGAVNRFLLAEPGGRIHHYDKRHLFRMAGEHHHY
HHEEEEEEEHHCCCEEECCEEEEECCCCHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCC
QAGSERKVVEWRGWRIFPQICYDLRFPVWSRNQQDYDLALYVANWPTKRTQHWQTLLAAR
CCCCCCEEEEECCCEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
AIENQAYVAGCNRVGDDDNGHHYQGNSLILDAQGEVLAQAAPGQAAQLEAELSLEALQHY
HHCCCEEEEECCCCCCCCCCCEEECCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
REGFPAWRDADPFKLL
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]