| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yfiP
Identifier: 51595202
GI number: 51595202
Start: 1029025
End: 1029774
Strand: Reverse
Name: yfiP
Synonym: YPTB0852
Alternate gene names: 51595202
Gene position: 1029774-1029025 (Counterclockwise)
Preceding gene: 51595203
Following gene: 51595201
Centisome position: 21.7
GC content: 53.87
Gene sequence:
>750_bases GTGACTGACACATTCACCACTGGCCATACTTTACCTACGGCCATAACGACGGAAAATGCAGTCCTGCGTTTACGCCAACA ACGTTTAGCCGCCGCCACCCGTGCGTATCGTGCCCGCGGCTGCCGGGCCATCCGTTGCCAAAACTGCCTGCTGGCCGAGC GTTTCTGCCTGTGTGATACCATCAAGCCACAACAGGCAAACAGCCGGTTTTGCCTAATTATGTTTGATACCGAGCCACTC AAGCCCAGTAATACCGGCCGCCTTATCGCGGATATCCTGCCCGATACACACGCTTTTCTCTGGGCGCGAACCGAAGTCGA TCCTGAGCTATTAGCCGCTATCAGTGACCCTCTGCGTCAACCTTATGTGGTTTTTCCTGAGGCCTATGCTGAGCCAGAAC GGCAAGTGATCAATCAATTACCCATCAGCGATAAACCGCCGCTATTTATTTTGCTGGACGGTACCTGGACTGAAGCCAAG AAGATGTTCCGCAAAAGCCCCTATCTTGCCGGGTTACCCCTGCTGTCCTTGCAGGTCAGCCATCTATCCGATTATCAATT ACGGGAAGCGCAGCGCCCTGAACAACACTGTACTGTCGAAGTCGCCACCGCGCTGCTCCACCAAGCGGGTGATATACAAG CCGCAGAAGGGCTACGCGATCACTTTCACTACTTCCGTCAACAATATTTAGCCGGAAAACCTCATCACCCAGTGGGGCGA GTCACAGCAGGACACGAAGAAAACGCGTAA
Upstream 100 bases:
>100_bases AGGGCTGTTCAGGCCATTGATAAAATCCACCCCCTGCCAGTTTTCTGTCGGGGCGTGGGCCATTCTATATTAGAATGGCG CTATTTTTCAGGAGTCCGTC
Downstream 100 bases:
>100_bases AGTCAGAGAAGCTATCCTTATATAAACAACAGGAACCTGCACATGAGCCAACGTGGATTAGAAGCACTGTTACGTCCGAA ATCTATCGCAGTGATCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIRCQNCLLAERFCLCDTIKPQQANSRFCLIMFDTEPL KPSNTGRLIADILPDTHAFLWARTEVDPELLAAISDPLRQPYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAK KMFRKSPYLAGLPLLSLQVSHLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHFHYFRQQYLAGKPHHPVGR VTAGHEENA
Sequences:
>Translated_249_residues MTDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIRCQNCLLAERFCLCDTIKPQQANSRFCLIMFDTEPL KPSNTGRLIADILPDTHAFLWARTEVDPELLAAISDPLRQPYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAK KMFRKSPYLAGLPLLSLQVSHLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHFHYFRQQYLAGKPHHPVGR VTAGHEENA >Mature_248_residues TDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIRCQNCLLAERFCLCDTIKPQQANSRFCLIMFDTEPLK PSNTGRLIADILPDTHAFLWARTEVDPELLAAISDPLRQPYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAKK MFRKSPYLAGLPLLSLQVSHLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHFHYFRQQYLAGKPHHPVGRV TAGHEENA
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTW family [H]
Homologues:
Organism=Escherichia coli, GI87082133, Length=232, Percent_Identity=61.6379310344828, Blast_Score=285, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005636 [H]
Pfam domain/function: PF03942 DTW [H]
EC number: NA
Molecular weight: Translated: 28122; Mature: 27991
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIRCQNCLLAERFCLCDT CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCC IKPQQANSRFCLIMFDTEPLKPSNTGRLIADILPDTHAFLWARTEVDPELLAAISDPLRQ CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC PYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAKKMFRKSPYLAGLPLLSLQVS CEEECCHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH HLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHFHYFRQQYLAGKPHHPVGR HCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VTAGHEENA EECCCCCCC >Mature Secondary Structure TDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIRCQNCLLAERFCLCDT CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCC IKPQQANSRFCLIMFDTEPLKPSNTGRLIADILPDTHAFLWARTEVDPELLAAISDPLRQ CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC PYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAKKMFRKSPYLAGLPLLSLQVS CEEECCHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHH HLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHFHYFRQQYLAGKPHHPVGR HCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VTAGHEENA EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]