| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yfiQ
Identifier: 51595201
GI number: 51595201
Start: 1026340
End: 1028982
Strand: Reverse
Name: yfiQ
Synonym: YPTB0851
Alternate gene names: 51595201
Gene position: 1028982-1026340 (Counterclockwise)
Preceding gene: 51595202
Following gene: 51595200
Centisome position: 21.69
GC content: 51.91
Gene sequence:
>2643_bases ATGAGCCAACGTGGATTAGAAGCACTGTTACGTCCGAAATCTATCGCAGTGATCGGTGCTTCTGAAAAACCTGAGCGAGC GGGTTTTCTGATGATGCGCAACTTGCTGGATGGCGGTTTCAATGGACCGATTCTCCCGGTAACGCCCAATCACAAAGCGG TGTGCGGTGTCTTGGCTTACGCCAATATCGCCAGCCTACCCATCACTCCTGATTTAGCGATTTTGTGCACCCATGATTGC CGTAATCTGACGCTACTGGAAGACCTTGGGAACCGGGGCTGTAAAGCCGCCATTATTTTGTCTGCTACACCGGAGCAGTT CCCAGAACTGAAAGCCTGCGCTCAACGCCACCATATGCGGCTACTCGGGCCTAATAGCCTGGGGTTACTGGCCCCGTGGC AAGGGCTGAATGCCAGCTTTTCACCCGTCCCCATCAAGAAAGGGCGGCTGGCGTTTATCTCCCAGTCTGCAGCCGTAGCC AATACGATCCTTGATTGGGCGCAGCAACGAGAAGTTGGCTTTTCTTACTTTATTGCACTGGGCGACAGCTTGGATATTGA TGTCGATGACCTACTCGATTTCCTTGCCCGAGACAGCAAAACCAGCGCGATTATGCTGTATATCGAACATATCAGCGATG CACGCCGCTTCTTATCCGCTTCCCGCAGTGCTTCACGCAATAAACCGGTTTTGGTGGTGAAAAGTGGCCGCAGTCAGCGC GCTCAACAGCTCTTGAATGGTCAGCAAGGATTGGATGCCGCCTATGATGCCGCTATCCAGCGGGCCGGGTTGCTGCGAGT ACAGGATACCCATGAATTGTTCTCTGCCGTTGAGACTCTCAGCCATATGCGCCCACTGCGCGGTGAACGGCTGTTGATTG TCAGCAATGGTTCAGCACCGGCAGCGATGGCGTTGGATGAACTTATCCGCCGTAATGGTAAATTGGCAACCTTGTCGGAT GCCACGCAATCCGCACTGAGTGAAGCTCTGCCGCCTTTTGTTGCGCTACGTAACCCAATAGACCTACGGGATGATGCCAG TGCTGAGCGCTATTTAGCGGCACTCAAGCCGCTATTGGACAGTAGTGATTACGATACGCTGCTCCTGATCCACTCGCCCA GCGCCGCCGCACCGGGAGGCAAAACGGCTGAATTATTGATTTCAGCTATTCGCCAACATCCGCGCGGTAAACGCATCACG TTACTCACCAATTGGTGTGGTGAATATTCATCACAAGATGCCCGTCGCTTGTTTACTGAAGCGGGTATTCCAACCTATCG CACCCCGGAAGGCGCGATCACGGCTTTTATGCATATGGTGGAGTATCGTCGTAATCAGAAACAACTGAAAGAGACCCCGG CATTACCAATAGGTTTGACCGCCAATACTGCCCATGTCCATCAGCTAATTCGCCAGGCCTTGGCCGAAGGGGCAACCCAG CTTGATACCCATGAAGTGCAACCCATTCTTGAAGCGTATGGCCTCAGGACATTGCCAACCTGGATTGCTAGCGACAGTGT AGAAGCCGTACATATTGCTGAACGACTGGGCTATCCGGTCGCAATTAAACTTCGCTCGCCTGATATCCCGCATAAATCGG AAGTTCAGGGGGTCATGTTGTATTTGCGCACCGCCATTGAAGTGCAGCGGGCGGCAGACGATATCCTCGATCGGGTAAAG CGGACCTATCCACAAGCACGAATTCACGGTTTGCTGGTGCAAAGCATGGCGAATCGAGCAGGAGCACAAGAATTGCGTAT TGCTGTGGAGCAAGATGCTATTTTCGGCCCGTTGATCATGTTAGGTGAAGGCGGTATTGAGTGGCACCACGAGACACAAG CCGCTGTCGCACTACCGCCTCTCAATATGGTGCTGGCGCGCTACCTGATTATACAGGCCGTCAAAGGGGGGAAAATTCGC AGCCGCGGATCACTACAACCTTTGGATATTCCAGGGCTAAGCCGCTTGCTGGTACAAGTTTCCAACTTGATCCTCGACTG CCCCGAAATCACCCGTCTGGATATTCACCCGGTACTGGCCTCCGGCAGTGAGTTCACGCTGCTGGATGTGTCGATGCAAT TAGCCCCTGTCATTGGCGACCCTCAAGCTCGTCTGGCAATTCGCCCGTATCCGCATGAATTGGAAGAAAAGGTCACGCTC AGAGACAACTCCCAGTGCTTATTCCGCCCGATTCTGCCGGAAGATGAGCCACTGCTAAAACTGTTTATTGATCAAGTAAC TAAAGAAGACCTTTATTATCGCTACTTCAGTGAAATCAATGAATTCAGCCATGATGATTTGGCGAATATGACACAAATTG ACTATGATCGGGAAATGGCTTTTGTTGCTGTGCGTCAAAATAGTGAAGGGCCAGAGATCATAGGTGTCACGCGGGCATTT TCTGATCCTGACAACATTGATGCCGAATTTGCCGTACTGGTCCGCTCGGATCTAAAAGGGCTGGGCTTAGGCAGGGCATT ACTTGAGAAGATGATCCGTTATGCCCGTAGCCATGGGCTATCCCGGCTCACCGCAGTCACCATGCCAAATAACCGCGGTA TGATTGGTTTGGCACAAAAACTCGGTTTTACTATTGATGTGCAAATAGAAGATGGGATCGTAAATCTGGAGCTGACACTT TGA
Upstream 100 bases:
>100_bases CGGAAAACCTCATCACCCAGTGGGGCGAGTCACAGCAGGACACGAAGAAAACGCGTAAAGTCAGAGAAGCTATCCTTATA TAAACAACAGGAACCTGCAC
Downstream 100 bases:
>100_bases TCTTTGTTACACCAATCAGCGTGATATAGGCCACAGAGCTAAGTGATTCAGCCATTGGCAGGCAAAACTTGCGCACAATC CAGAAAAGTAATGGTATTAT
Product: acyl-CoA synthetase, NAD(P)-binding, ATP-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 880; Mature: 879
Protein sequence:
>880_residues MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDC RNLTLLEDLGNRGCKAAIILSATPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVA NTILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSD ATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRIT LLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVK RTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIR SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVIGDPQARLAIRPYPHELEEKVTL RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAF SDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL
Sequences:
>Translated_880_residues MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDC RNLTLLEDLGNRGCKAAIILSATPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVA NTILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSD ATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRIT LLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVK RTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIR SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVIGDPQARLAIRPYPHELEEKVTL RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAF SDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL >Mature_879_residues SQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCR NLTLLEDLGNRGCKAAIILSATPEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVAN TILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQRA QQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSDA TQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITL LTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQL DTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVKR TYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRS RGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVIGDPQARLAIRPYPHELEEKVTLR DNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAFS DPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=880, Percent_Identity=75.4545454545455, Blast_Score=1375, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 96813; Mature: 96682
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAY CCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH ANIASLPITPDLAILCTHDCRNLTLLEDLGNRGCKAAIILSATPEQFPELKACAQRHHMR HHHCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCEE LLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEE GDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR CCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAP HHHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AAMALDELIRRNGKLATLSDATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLD HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHC SSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITLLTNWCGEYSSQDARRLFTE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH AGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHH LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH YLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCEEE LGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRSRGSLQPLDIPGLSRLLVQV ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH SNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVIGDPQARLAIRPYPHELEEKVTL HHHHCCCCCCCEEECCCEECCCCCEEEEEEEEEEECCCCCCCCCEEECCCCHHHHCEEEE RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMA CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE FVAVRQNSEGPEIIGVTRAFSDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGL EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHCCC SRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL CEEEEEECCCCCCCEEEHHHCCCEEEEEEECCEEEEEEEC >Mature Secondary Structure SQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAY CCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH ANIASLPITPDLAILCTHDCRNLTLLEDLGNRGCKAAIILSATPEQFPELKACAQRHHMR HHHCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCEE LLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEE GDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASRSASRNKPVLVVKSGRSQR CCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH AQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLLIVSNGSAP HHHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AAMALDELIRRNGKLATLSDATQSALSEALPPFVALRNPIDLRDDASAERYLAALKPLLD HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHC SSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRITLLTNWCGEYSSQDARRLFTE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH AGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIGLTANTAHVHQLIRQALAEGATQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHH LDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH YLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCEEE LGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVKGGKIRSRGSLQPLDIPGLSRLLVQV ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH SNLILDCPEITRLDIHPVLASGSEFTLLDVSMQLAPVIGDPQARLAIRPYPHELEEKVTL HHHHCCCCCCCEEECCCEECCCCCEEEEEEEEEEECCCCCCCCCEEECCCCHHHHCEEEE RDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMA CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEE FVAVRQNSEGPEIIGVTRAFSDPDNIDAEFAVLVRSDLKGLGLGRALLEKMIRYARSHGL EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHCCC SRLTAVTMPNNRGMIGLAQKLGFTIDVQIEDGIVNLELTL CEEEEEECCCCCCCEEEHHHCCCEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]