| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is phnK
Identifier: 51594864
GI number: 51594864
Start: 602051
End: 602842
Strand: Reverse
Name: phnK
Synonym: YPTB0512
Alternate gene names: 51594864
Gene position: 602842-602051 (Counterclockwise)
Preceding gene: 51594865
Following gene: 51594863
Centisome position: 12.71
GC content: 54.92
Gene sequence:
>792_bases ATGATGTCAGCCCAATCTACCCCTCAGCCGCTGTTGTCGGTGGAGAATCTCACTCATTTATATGCGCCGGGCAAAGGATT CAGTGATGTCTCTTTTCAGCTCTATCCCGGTGAGGTTTTGGGGATCGTCGGCGAATCCGGCTCGGGTAAAACCACCTTGC TGAAAGCTATTTCGGCCCGTTTAGCCCCACAGCAGGGGCAGATCATTTACCGCACGGGTACACAGCAACCGGTTGATTTA TACGAAATGGCCGAAAGTCAGCGCCGCCGTTTGTTGCGTACCGAATGGGGTATGGTACATCAGCACCCACTGGACGGCTT GCGCCCACAAGTCTCCGCGGGCGGCAACATCGGCGAACGTTTAATGGCTACCGGCCAGCGCCATTACGGCGAGATCCGCC AACTTGCAGGCCGCTGGCTGGAAGATGTCGAGATCCCGTTATCCCGATTGGATGACCTCCCCACCACTTTCTCCGGCGGG ATGCAGCAGCGCCTGCAAATCGCCCGTAATTTGGTGACCCATCCGAAACTGGTTTTTATGGATGAACCTACGGGCGGCTT GGATGTATCAGTGCAGGCACGTTTACTGGATTTACTGCGCAATTTGGTGGTGGAAATGCAGCTAGCCGTGGTGATTGTCA CTCATGACTTGGGGGTAGCCCGCTTATTAGCTAACCGTCTATTGGTGATGAAAGAGGGCCAGGTTATCGAAAGCGGCCTG ACTGACCGGGTACTGGACGATCCCCATCACCCCTACACCCAACTCCTGGTCTCATCGGTACTGCAAAACTAA
Upstream 100 bases:
>100_bases GTAGCCGCATGTTTGTTTGCTCGGATACTGATTTTTGCCAGCAGCAACTGGCTCAAGCCAGCGCACAAGAAGCCACATCC CCAACCGAGGTACCTGTCTG
Downstream 100 bases:
>100_bases ACCACTGCTGGCTCTATTTTTGCTCTTTGATTTTGCATTTGCAGTTGGTTTTTGATTTTGACTTTTAGGCCGTTGACCTT GAACGGCGAATCGGCCAACG
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGMVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN
Sequences:
>Translated_263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGMVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN >Mature_263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGMVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=28.5123966942149, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=28.5123966942149, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=25.5411255411255, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI42490749, Length=268, Percent_Identity=27.6119402985075, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI105990541, Length=242, Percent_Identity=25.6198347107438, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI116734710, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=85.0980392156863, Blast_Score=435, Evalue=1e-123, Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=37.109375, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI145693107, Length=266, Percent_Identity=35.3383458646617, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=36.2869198312236, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1789962, Length=262, Percent_Identity=34.7328244274809, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI1787758, Length=235, Percent_Identity=38.2978723404255, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=35.361216730038, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1787759, Length=257, Percent_Identity=35.408560311284, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788506, Length=273, Percent_Identity=34.7985347985348, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1789672, Length=253, Percent_Identity=30.8300395256917, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=28.6259541984733, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786872, Length=254, Percent_Identity=31.1023622047244, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788225, Length=252, Percent_Identity=31.7460317460317, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=30.9623430962343, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1789891, Length=238, Percent_Identity=31.0924369747899, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1786398, Length=262, Percent_Identity=26.7175572519084, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=34.061135371179, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1789032, Length=249, Percent_Identity=28.1124497991968, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=28.3524904214559, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787089, Length=229, Percent_Identity=29.6943231441048, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788644, Length=255, Percent_Identity=30.5882352941176, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=27.3076923076923, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1787792, Length=243, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=30.2904564315353, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=26.8, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=34.5971563981043, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790525, Length=254, Percent_Identity=25.9842519685039, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=28.0172413793103, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=26.9230769230769, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790534, Length=199, Percent_Identity=33.1658291457286, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790162, Length=266, Percent_Identity=27.4436090225564, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1789991, Length=242, Percent_Identity=28.099173553719, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=28.82096069869, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790739, Length=246, Percent_Identity=30.4878048780488, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=30.7359307359307, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787105, Length=242, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=25.7936507936508, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=27.6150627615063, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787370, Length=262, Percent_Identity=23.6641221374046, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=32.2727272727273, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788897, Length=232, Percent_Identity=26.2931034482759, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786563, Length=220, Percent_Identity=30.4545454545455, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788450, Length=258, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789751, Length=231, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=27.3858921161826, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790467, Length=252, Percent_Identity=25.3968253968254, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=26.9058295964126, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=24.3478260869565, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082268, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081782, Length=252, Percent_Identity=26.1904761904762, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=26.1410788381743, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=24.8927038626609, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788053, Length=213, Percent_Identity=28.169014084507, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786981, Length=206, Percent_Identity=32.0388349514563, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=243, Percent_Identity=27.1604938271605, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788472, Length=256, Percent_Identity=24.21875, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=242, Percent_Identity=26.0330578512397, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI115534520, Length=241, Percent_Identity=25.3112033195021, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17543740, Length=235, Percent_Identity=25.1063829787234, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17558664, Length=215, Percent_Identity=26.5116279069767, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25146777, Length=230, Percent_Identity=24.7826086956522, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=256, Percent_Identity=20.703125, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=250, Percent_Identity=29.2, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=27.5555555555556, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397593, Length=248, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007184, Length=245, Percent_Identity=27.3469387755102, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=245, Percent_Identity=27.3469387755102, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643674, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 29096; Mature: 29096
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISAR CCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH LAPQQGQIIYRTGTQQPVDLYEMAESQRRRLLRTEWGMVHQHPLDGLRPQVSAGGNIGER CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHH LMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE DEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEECCCHHHCCC TDRVLDDPHHPYTQLLVSSVLQN CHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISAR CCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH LAPQQGQIIYRTGTQQPVDLYEMAESQRRRLLRTEWGMVHQHPLDGLRPQVSAGGNIGER CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHH LMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE DEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEECCCHHHCCC TDRVLDDPHHPYTQLLVSSVLQN CHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]