| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594599
Identifier: 51594599
GI number: 51594599
Start: 287857
End: 288525
Strand: Direct
Name: 51594599
Synonym: YPTB0244
Alternate gene names: NA
Gene position: 287857-288525 (Clockwise)
Preceding gene: 51594598
Following gene: 51594600
Centisome position: 6.07
GC content: 41.41
Gene sequence:
>669_bases ATGAACCAGGTCGATGTGCAGAAAGACATTAGTGATTTGATTGTTAACGCCTTCCCAAGGGCGTTATGGCTAAACATACA AGATGTGTTTCATGCGAAATATGAGGCCGCACAGCAAGTCACTATGGGGTCAGCACTAAAGCTTGATGGTCCAGGGCAAC TTCGGCTAAGACCTCAAATAAGACATTATACTTTGAATGCGGCATTCAAAGAGGCGGCCTTGAGTTGTGGGGTTATTCAT AACAGTGTTGAGACTTCACCAAAAGGTGAGCATTTTGTTGTCTTAAGTTCGGCTGGTGTCAAAATGAGCAGGATTGGGCT TAACTATGATGAACCCAATATCAAAGGTGCTAAGCATCGGACGCTTTTAGCCGAACTCAACGAAAGCTTGGAAGGGTACA CACCTGATTTATTTAGCGAAAGAACCATAGACCATGGGCCAACAGGAACGTTAGGTGTCTTAATTCTAAATATCAATCCA CCTTATCATGAACCACAGAGCAGGATGCTCGATTTAAGGGTTGTGGTACCTTTCAGTAATTTGAAAGGATTCCATTTTAA TTGGTCATTAACTCAACTTTTAGAGCGGTATACTGGTGAGCAAAAAATTATCATTCCTGATAATGTCTTGCCTACACTAA AACGGCATCTGAAAGATCAAGAAAATTAA
Upstream 100 bases:
>100_bases GATGTCTGTCACATCATGACAAGAACTCATATATTGGCCTTGATGCCAAAACGAAAAAAAACTAATATAAAATCCGCTTA ACGAAATCACGGTATCCAAA
Downstream 100 bases:
>100_bases GTCGGCGGTACTATGAGAGTGGGAATATCTGGATTTCAGCCAGAAAGACTAACCCAAATGCGAGAAGCTCGAGGGTTATC CAAAATAAACTTGGGTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNQVDVQKDISDLIVNAFPRALWLNIQDVFHAKYEAAQQVTMGSALKLDGPGQLRLRPQIRHYTLNAAFKEAALSCGVIH NSVETSPKGEHFVVLSSAGVKMSRIGLNYDEPNIKGAKHRTLLAELNESLEGYTPDLFSERTIDHGPTGTLGVLILNINP PYHEPQSRMLDLRVVVPFSNLKGFHFNWSLTQLLERYTGEQKIIIPDNVLPTLKRHLKDQEN
Sequences:
>Translated_222_residues MNQVDVQKDISDLIVNAFPRALWLNIQDVFHAKYEAAQQVTMGSALKLDGPGQLRLRPQIRHYTLNAAFKEAALSCGVIH NSVETSPKGEHFVVLSSAGVKMSRIGLNYDEPNIKGAKHRTLLAELNESLEGYTPDLFSERTIDHGPTGTLGVLILNINP PYHEPQSRMLDLRVVVPFSNLKGFHFNWSLTQLLERYTGEQKIIIPDNVLPTLKRHLKDQEN >Mature_222_residues MNQVDVQKDISDLIVNAFPRALWLNIQDVFHAKYEAAQQVTMGSALKLDGPGQLRLRPQIRHYTLNAAFKEAALSCGVIH NSVETSPKGEHFVVLSSAGVKMSRIGLNYDEPNIKGAKHRTLLAELNESLEGYTPDLFSERTIDHGPTGTLGVLILNINP PYHEPQSRMLDLRVVVPFSNLKGFHFNWSLTQLLERYTGEQKIIIPDNVLPTLKRHLKDQEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24973; Mature: 24973
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVDVQKDISDLIVNAFPRALWLNIQDVFHAKYEAAQQVTMGSALKLDGPGQLRLRPQI CCCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCE RHYTLNAAFKEAALSCGVIHNSVETSPKGEHFVVLSSAGVKMSRIGLNYDEPNIKGAKHR EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHH TLLAELNESLEGYTPDLFSERTIDHGPTGTLGVLILNINPPYHEPQSRMLDLRVVVPFSN HHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC LKGFHFNWSLTQLLERYTGEQKIIIPDNVLPTLKRHLKDQEN CCCEEECCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure MNQVDVQKDISDLIVNAFPRALWLNIQDVFHAKYEAAQQVTMGSALKLDGPGQLRLRPQI CCCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCE RHYTLNAAFKEAALSCGVIHNSVETSPKGEHFVVLSSAGVKMSRIGLNYDEPNIKGAKHR EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHH TLLAELNESLEGYTPDLFSERTIDHGPTGTLGVLILNINPPYHEPQSRMLDLRVVVPFSN HHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC LKGFHFNWSLTQLLERYTGEQKIIIPDNVLPTLKRHLKDQEN CCCEEECCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA