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The map label for this gene is mdcF [H]

Identifier: 51594598

GI number: 51594598

Start: 286764

End: 287720

Strand: Direct

Name: mdcF [H]

Synonym: YPTB0243

Alternate gene names: 51594598

Gene position: 286764-287720 (Clockwise)

Preceding gene: 51594597

Following gene: 51594599

Centisome position: 6.04

GC content: 53.08

Gene sequence:

>957_bases
ATGCCCGCCTTTGTTGTTTCGCTCTGGCACCAAATCGTTTTGTCTTCACCGTTATTTGTTTTGCTCGCACTGGGATATGC
TCTGGTGCGATTCGGTAAGTGGCCATCGACTATTACGGATGGTCTGACTCGCTTTGTTTTCTCCCTCGCGCTGCCTGCCA
TGCTATTTCGCATGATGTGTGACTTCTCCGAACGCCCGGCGGTTGATGCTCGCCTATTGATTGCTTTTTTTGGCAGTTGT
CTGGTGGTGTTTATCATTGGGCGGGTTATCGCCAAACGGGTGTTTCATCTGGATGGCGTTTCTGGCTCAGTCTTTGCCCT
CGGTGGGATCTTTTCCAATAACGTGATGCTAGGGCTACCTATTGCCACCATCATGCTGGGGGAGAAATCTATCCCTGCGG
TGGCCTTGGTGCTGGTATTTAACGGGCTGATCTTGTGGACGCTGGTCACCATCTCGGTGGAGTGGGCACGAAATGGTTCA
CCGACGATGGCTGGTTTTGTGAAAACGACCCGTAGTGTGCTGACTAACCCACTCATTATCGGGATTATTTCCGGCACCTT
ATTCAGCCTGACGGGGTTACATTTACCGGTGTTTATTGACCAACCGGTCAGTATGTTAGGGCAGGTTGCACCTCCGCTCT
CATTGATTGTCTTGGGCATGGGGCTGGCAGAATACCGCGTGACCGAAGGTTGGCAGATTAGTACCGCTATCTGCTTTCTC
AAGTTGATTGTGCAGCCGATGGTGATTTGGGCGCTGGCATGGGCGATGGATCTGCCCGCGCTAGAAACTCAAGTCGTGGT
GTTGCTGGGGTCGATGGCAACGGGGGTGAATGTTTATCTGATGTCACGTCAGTTTAATGTCCTCACCGGCCCCGCCGCCG
CCAGCCTGGTGATGTCAACGGTACTGGCCGCCGTCACCACGCCACTGATTCTGACCATTATTGGGGTGGGCATATAG

Upstream 100 bases:

>100_bases
CCTTCTCCTATAAAGACCCTCAATACCCGCCATAATAAAAACAGGTCAGCCATTCTTACATTTACGGGCTGACCTGGCCC
GGCCTGACAGGAAGTAAATC

Downstream 100 bases:

>100_bases
TGTGATAGGGGTATGCAATGTGCAGTGGCCCGTTGGGATGTCTGTCACATCATGACAAGAACTCATATATTGGCCTTGAT
GCCAAAACGAAAAAAAACTA

Product: malonate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI

Sequences:

>Translated_318_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI
>Mature_317_residues
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSCL
VVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSP
TMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFLK
LIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMSTVLAAVTTPLILTIIGVGI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34077; Mature: 33945

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTMAGFVKTTRSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHH
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMST
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHH
VLAAVTTPLILTIIGVGI
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTMAGFVKTTRSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHH
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVMST
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHH
VLAAVTTPLILTIIGVGI
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]