| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843726
Identifier: 50843726
GI number: 50843726
Start: 2484814
End: 2485641
Strand: Direct
Name: 50843726
Synonym: PPA2289
Alternate gene names: NA
Gene position: 2484814-2485641 (Clockwise)
Preceding gene: 50843722
Following gene: 50843729
Centisome position: 97.05
GC content: 59.66
Gene sequence:
>828_bases ATGGTCACCGGTAGTAACGGCACCTCAGGCAAGAAATCGCAAGCTAGCACGCACACCTGGGCAATCCTCTTCTTCCTCGC CCTCATCGTCGTTATGCGGCATAGCGCCTTGGGTGCGCTCCTCAGCTTGGTGGTGGTCATGACGATCATCATGTGGGTCG TTCAAAGACAGAAGGCTCAGGCCAAACGAGTCAAAAACGGTGGGCACCACGAGTCCACCTCGGACAAGCAAAATCTGGGG AACCTGAACCCCAACCCCACAGACGACAAGAAGGTCATTGAACGCAGACCTCGATCATCAGCAAACAGGGCCGACAGCTT CTCCGCCTCTCCGGACAAGGGCCTGTTCGGTGGCTCCTTCGCTGCTCTGACCGATGCGTTGCCCGGCAACGTTGATGAGC CCGGTAAGCACATTGAACCCGCGCAACCTCAGCAACATCACCCAGCCCCGGAACGAGGGTCTTCGCAGCATCATGCTTAT GCACCGCGCCCCTCCCATCAGCCTCCGGATTCCGTGAGTTTTCACGACCCCGAATCCCTTCGGCCTGAGATCTCTCGGCC CGGAGTCGAGCCAGCGACCAAGCCTGCCTCCCGTGTTCTGGCACCCGCCCCACCGATAAAAACCACAGCCCCGGCTCCTG CTGTCACTCAGAAAGCCGCCTCAACCGCTGCCCCGGCAAAAATCGCCCGCGGCAGCCGATTCGACGACAACCGAGGCGGA TCGGCAGCTATTTCCATGACCCGTGAATCAGCTACGACAAGCCTGCACGAGGTCCCCGAATACAACGGTTCGTGCCTATC CACGTCTTCCCTCTTCGCGCAGCAATGA
Upstream 100 bases:
>100_bases GAGTCCGCGCGCAGATAGGGCAACATCCGGTCACCTAAGATGATCCTTTTCCATTTCTACCCGTCCGTCAGGGGACACAT CAATCACGTATCCTAGCGAC
Downstream 100 bases:
>100_bases CTGAATTAGCACAGCGGTAATCGGAAAACCCGCTCATTCGCGGTCCCGTCACGAGGAACAGCAAAATAAGTCTGACCTCC GGCGGACCGGGCATGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQAKRVKNGGHHESTSDKQNLG NLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSFAALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAY APRPSHQPPDSVSFHDPESLRPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ
Sequences:
>Translated_275_residues MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQAKRVKNGGHHESTSDKQNLG NLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSFAALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAY APRPSHQPPDSVSFHDPESLRPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ >Mature_275_residues MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQAKRVKNGGHHESTSDKQNLG NLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSFAALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAY APRPSHQPPDSVSFHDPESLRPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29201; Mature: 29201
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKRVKNGGHHESTSDKQNLGNLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSF HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH AALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAYAPRPSHQPPDSVSFHDPESL HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC RPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCC SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ CEEEEEHHHHHHHHHHHHHCCCCCEECHHHHHHCC >Mature Secondary Structure MVTGSNGTSGKKSQASTHTWAILFFLALIVVMRHSALGALLSLVVVMTIIMWVVQRQKAQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKRVKNGGHHESTSDKQNLGNLNPNPTDDKKVIERRPRSSANRADSFSASPDKGLFGGSF HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH AALTDALPGNVDEPGKHIEPAQPQQHHPAPERGSSQHHAYAPRPSHQPPDSVSFHDPESL HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC RPEISRPGVEPATKPASRVLAPAPPIKTTAPAPAVTQKAASTAAPAKIARGSRFDDNRGG CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCC SAAISMTRESATTSLHEVPEYNGSCLSTSSLFAQQ CEEEEEHHHHHHHHHHHHHCCCCCEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA