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The map label for this gene is ydiQ [H]

Identifier: 50843649

GI number: 50843649

Start: 2398463

End: 2399224

Strand: Reverse

Name: ydiQ [H]

Synonym: PPA2214

Alternate gene names: 50843649

Gene position: 2399224-2398463 (Counterclockwise)

Preceding gene: 50843650

Following gene: 50843648

Centisome position: 93.71

GC content: 56.3

Gene sequence:

>762_bases
ATGACAATTGCTGTGGCATATAAAGTAGCCGCTAATCCGCAGGACGCACGTGTAGAACCAGATGGGAGGATCGATTGGTC
CCGCGGGAAACTCGGCATCAGTGACTATGATCCGGCCGCGATTCAGGTTGCCAGAGAGGCGGCCGATGTTTCTGGTACCG
AACTTGTGGGTGTCAGTGTTGGAACGGTCGCAGCGACTGCTGCCAAGGAGAAGAAAAACGTCTTGGCTCGTGGTCTGGAT
CGAGTTATGACCTTGGGGGACGACAAGACGAGTGAATGGTCGAGCGTCCAGGTTGCGGGCGCGCTCGCGGCTCTCATCCA
ACGAATCGGGGGTGTCACTTTAGTCGTTACTGGAGATGCGTTTGTTGACGAGGGTGCGCAATTGATGCCTGCACTTGTTG
GAGCTCGCCTCGGACTTCCTACTTTCCTGGAAGTCACGCACGTCGAGCCTTCTGGAACGGGTTGGCAAATTACGCAAAAC
TACGACGGTGGTAGCCGTGTTGTCCGCACGGATGGTGCTGCGGTTATTGCCACCACTCCAGATGCGACGACTCCGAAAGC
GCCGGGAATGAAGGACATTCTTAAGGCGGCGAAGAAGCCGATGGAGGATGTGAAGTGCTCCGAGTTGGATCTTTCGCGGG
CAACGGTGAATGTTGTCTCGCGTGGGCCAGCTCCGGTGAAGGAGCGGAAGCATCAAGTGTTCAGTGGGGATGGTGCTGCT
GCCCAACTTGTTGCTGCACTCCGTGATGCATCGGTCATTTGA

Upstream 100 bases:

>100_bases
CGTGGAGTACGTGAAGTTCGCGGGAGTTCTGTCTGCCATCCGCTAAGTGACTGATGACCAAATCGGACCGATATTATGTG
TCGGCCAGAAGGGAAAACCC

Downstream 100 bases:

>100_bases
CAAGAATTAAACAGGCGTGAAAGGGAGTCTTGATGTCGACGAGTTGGATTGTCACTGCGCAGCCAAACATTTCTCATATG
CTGGAGTTGACTGGCCAAAG

Product: putative electron transfer flavoprotein (FixA protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSVGTVAATAAKEKKNVLARGLD
RVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDAFVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQN
YDGGSRVVRTDGAAVIATTPDATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA
AQLVAALRDASVI

Sequences:

>Translated_253_residues
MTIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSVGTVAATAAKEKKNVLARGLD
RVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDAFVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQN
YDGGSRVVRTDGAAVIATTPDATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA
AQLVAALRDASVI
>Mature_252_residues
TIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSVGTVAATAAKEKKNVLARGLDR
VMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDAFVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQNY
DGGSRVVRTDGAAVIATTPDATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAAA
QLVAALRDASVI

Specific function: May play a role in a redox process [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=29.9212598425197, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87081682, Length=245, Percent_Identity=31.0204081632653, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26255; Mature: 26124

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSV
CEEEEEEEEECCCCCCEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEH
GTVAATAAKEKKNVLARGLDRVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCH
FVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQNYDGGSRVVRTDGAAVIATTP
HHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEECC
DATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA
CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCHH
AQLVAALRDASVI
HHHHHHHHHCCCC
>Mature Secondary Structure 
TIAVAYKVAANPQDARVEPDGRIDWSRGKLGISDYDPAAIQVAREAADVSGTELVGVSV
EEEEEEEEECCCCCCEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEH
GTVAATAAKEKKNVLARGLDRVMTLGDDKTSEWSSVQVAGALAALIQRIGGVTLVVTGDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCH
FVDEGAQLMPALVGARLGLPTFLEVTHVEPSGTGWQITQNYDGGSRVVRTDGAAVIATTP
HHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEECC
DATTPKAPGMKDILKAAKKPMEDVKCSELDLSRATVNVVSRGPAPVKERKHQVFSGDGAA
CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCHH
AQLVAALRDASVI
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]