| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843644
Identifier: 50843644
GI number: 50843644
Start: 2391776
End: 2392516
Strand: Direct
Name: 50843644
Synonym: PPA2209
Alternate gene names: NA
Gene position: 2391776-2392516 (Clockwise)
Preceding gene: 50843643
Following gene: 50843645
Centisome position: 93.42
GC content: 63.97
Gene sequence:
>741_bases ATGCCTGAACCCATGACTCCCGAGACCTTCCTCGACGCCTGCACAGTGGACGAGGCCGTATTCGAACTGCGCCCAGACTA CCGAGCCCTGCTGCTCGTGGTCGACGGCCTCACCCCGCCTGCATCCGGAGAGGGCAACAACATGGTCGACACACTCATCG CTCAGGCGGAGGCCCACGCGCGTAATCTCCTGGCAGATTCGCCAGTGAATGAGCTTGCGCATATCGCCTCGTGGCGGGAG GCATTTCGGGGCTTCGGGGCGAAGCCACAGCGCACGCGCAACTGTCTCGAAGCCCTCACCCGCCGCGCCGAGAAAGGTCT ACCGCGGGTGAACGCGCTTACTGACGTCTACAACGCGATCTCGGTGCTGCACCAGATTCCCCTCGGAGGCGAGGACCTTC ATCGCTACAACGGCCCGGCACGTCTGATCCGTGCCACGGGACAAGAATCGTTCGACACGACCGCGAACGGAGAGGCCGTG ATCGAGCACCCTGAAATCGGTGAGGTCATCTGGTGCGACGACGCCGGGGTGACGTGCCGGCGGTGGAATTGGCGGCAGGA TCGACGCACCGGCCTCACCGATACCACTCGGACGGCGTTGTTCATCCTCGACGCCCTCGCCCCAGTTACCGACGAGGAAC TGCACGCCACCAGCGACGCACTCATTGAGGCGCTGGCGAACCTAGGCGAAAACGTGCAGACCACAACACGGCTGATAGGC GCGCAACCCAGCGGGAACTGA
Upstream 100 bases:
>100_bases CGCCGCCCATGCCTACATAAACTCAACCGATAATTCTGCCCGGTTCTCACTGACGGTGTTCGAGCCGGACGTGGGAACCG CACACTGAAAGGAAACCCCG
Downstream 100 bases:
>100_bases CGACGAAATCACGATCATCACACTCACTGTGCTCGATTCGACCGGCCACCATGCCTATCACCTGGGCGAACATACCCACA TTGCAGAGCTGACCGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: B3/4 Domain-Containing Protein; Solo B3/4 Domain-Containing Protein; Cytoplasmic Protein; tRNA Ligase; Phosphoenolpyruvate Synthase
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHARNLLADSPVNELAHIASWRE AFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAISVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAV IEHPEIGEVIWCDDAGVTCRRWNWRQDRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG AQPSGN
Sequences:
>Translated_246_residues MPEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHARNLLADSPVNELAHIASWRE AFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAISVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAV IEHPEIGEVIWCDDAGVTCRRWNWRQDRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG AQPSGN >Mature_245_residues PEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHARNLLADSPVNELAHIASWREA FRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAISVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAVI EHPEIGEVIWCDDAGVTCRRWNWRQDRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIGA QPSGN
Specific function: Unknown
COG id: COG3382
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26932; Mature: 26801
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHA CCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RNLLADSPVNELAHIASWREAFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAI HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAVIEHPEIGEVIWCDDAGVTCR HHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEE RWNWRQDRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC AQPSGN CCCCCC >Mature Secondary Structure PEPMTPETFLDACTVDEAVFELRPDYRALLLVVDGLTPPASGEGNNMVDTLIAQAEAHA CCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RNLLADSPVNELAHIASWREAFRGFGAKPQRTRNCLEALTRRAEKGLPRVNALTDVYNAI HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SVLHQIPLGGEDLHRYNGPARLIRATGQESFDTTANGEAVIEHPEIGEVIWCDDAGVTCR HHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEE RWNWRQDRRTGLTDTTRTALFILDALAPVTDEELHATSDALIEALANLGENVQTTTRLIG CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC AQPSGN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA