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The map label for this gene is ygjQ [H]

Identifier: 50843568

GI number: 50843568

Start: 2306464

End: 2307150

Strand: Reverse

Name: ygjQ [H]

Synonym: PPA2130

Alternate gene names: 50843568

Gene position: 2307150-2306464 (Counterclockwise)

Preceding gene: 50843569

Following gene: 50843566

Centisome position: 90.11

GC content: 61.28

Gene sequence:

>687_bases
GTGAAACACGGGTTATACAGTGGGAATGTGAGTTCGTGCCGCCGACACCCAATTCGCACTGCGATCGTGTCGACATGCAT
TGCTGCCTTTGTTGCACTGTTGGGGCCTTGGACGCTGGCTGCGGCACTGTCATACGGCAAGGTTCACGACGTCGCTGACA
CTGAACCGCGCGACGTCGCCATTGTCCTCGGTGCCCAAGTCCTGCCCTCGGGTACCCCGTCGGCCTATCTGCGAGGACGC
CTCGACGTTGCCGCGGATCTCTACCGCAGCGGCAAGGCCAAGGTCATCCTGGTGTCGGGAGACAACCGAGAGACTCACTA
CAACGAGCCTAAAGTGATGAAGACGTACCTCGTCAGCAAGGGAGTTCCGGCGGCCAGGATCGTCGAGGACTTCGCTGGTC
TCGGCACCTACGACACCTGTGTTCGGGCTCGACGGATCTTCGGGGTCGACCGAGCCATCATGGTGACGCAGGACTACCAC
GAGATTCGTACCGTCGCGACGTGCCGGATGACCGGGCTTGATGCTGTCGGGGTTCCCGATCGCACCCAGCCTCGCGATAA
CGTGTGGTGGTATGGCTGGGGTCGCGAATTCGGGTCCCGGCTCAAAATGATCTGGGACGTCGCCAGCCGGCGAGAACCGA
CTTTGGGGCAGACTGATAACGGGGTCCGCGAAGCCCTCAACTCGTAA

Upstream 100 bases:

>100_bases
ATAAGCGGTAGGGATAGCGACAGAGTTTTGGATAGGCGGCGTGGTGCCGTGGTGACCTCTTTGTGCTACCACGTGCCATT
GCAGTCGCTGGACGCCGTGA

Downstream 100 bases:

>100_bases
GGACAGACGATTGGCCCCGGCAACCGCGTTGCCGGGGCCAAGCTATGACCGGTTATTGTTGCAGAATCAGAAGTCGGCGG
TAGAAGGGTCACCACCGAGC

Product: OmpA family membrane associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKHGLYSGNVSSCRRHPIRTAIVSTCIAAFVALLGPWTLAAALSYGKVHDVADTEPRDVAIVLGAQVLPSGTPSAYLRGR
LDVAADLYRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIFGVDRAIMVTQDYH
EIRTVATCRMTGLDAVGVPDRTQPRDNVWWYGWGREFGSRLKMIWDVASRREPTLGQTDNGVREALNS

Sequences:

>Translated_228_residues
MKHGLYSGNVSSCRRHPIRTAIVSTCIAAFVALLGPWTLAAALSYGKVHDVADTEPRDVAIVLGAQVLPSGTPSAYLRGR
LDVAADLYRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIFGVDRAIMVTQDYH
EIRTVATCRMTGLDAVGVPDRTQPRDNVWWYGWGREFGSRLKMIWDVASRREPTLGQTDNGVREALNS
>Mature_228_residues
MKHGLYSGNVSSCRRHPIRTAIVSTCIAAFVALLGPWTLAAALSYGKVHDVADTEPRDVAIVLGAQVLPSGTPSAYLRGR
LDVAADLYRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIFGVDRAIMVTQDYH
EIRTVATCRMTGLDAVGVPDRTQPRDNVWWYGWGREFGSRLKMIWDVASRREPTLGQTDNGVREALNS

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1788466, Length=168, Percent_Identity=35.1190476190476, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25110; Mature: 25110

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHGLYSGNVSSCRRHPIRTAIVSTCIAAFVALLGPWTLAAALSYGKVHDVADTEPRDVA
CCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
IVLGAQVLPSGTPSAYLRGRLDVAADLYRSGKAKVILVSGDNRETHYNEPKVMKTYLVSK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHC
GVPAARIVEDFAGLGTYDTCVRARRIFGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVPD
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
RTQPRDNVWWYGWGREFGSRLKMIWDVASRREPTLGQTDNGVREALNS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKHGLYSGNVSSCRRHPIRTAIVSTCIAAFVALLGPWTLAAALSYGKVHDVADTEPRDVA
CCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
IVLGAQVLPSGTPSAYLRGRLDVAADLYRSGKAKVILVSGDNRETHYNEPKVMKTYLVSK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHC
GVPAARIVEDFAGLGTYDTCVRARRIFGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVPD
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
RTQPRDNVWWYGWGREFGSRLKMIWDVASRREPTLGQTDNGVREALNS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]