| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843555
Identifier: 50843555
GI number: 50843555
Start: 2291412
End: 2291735
Strand: Direct
Name: 50843555
Synonym: PPA2117
Alternate gene names: NA
Gene position: 2291412-2291735 (Clockwise)
Preceding gene: 50843554
Following gene: 50843556
Centisome position: 89.5
GC content: 61.42
Gene sequence:
>324_bases ATGTCCGCCACGACATGGTCCTCGGACGCGATTAGGATGCCCTGCATGGCTGTTTTCATTGTCGAAACCCATTACGATCC CGCCCATTCCGAAGAGCGCATGGCTGCGCGCCCGGCCCATCTGGAGAACCTTGACGTCATGCGCGAGCGTGGCCAGCTCG CCAATGCCGGCCCGTTAGCCGACGGAAGCGGGGCGGTGCTCATCTATACCGTGCCTGACCGTGACGTCCTCAACCACTTA CTGGAGGCCGACCCCTATCCCAAGACGGCCGTCCAAGTGACCTCCGTTCGCGAGTGGAAGCCGAATTACCACCATCACGT CTGA
Upstream 100 bases:
>100_bases CAACCCAAAACAACTCTGACAAGGTCTTTCGCACGTGTGGCAATCGGGTTCACGACTGCTGGCCATGCGGCACGCGATGG CAACCCATTTCAGAGGCAAC
Downstream 100 bases:
>100_bases GGCCGGCGGCAGCAGAGGGCTCGGGGGTTGAAACACGTGATGTTATGGAGTCATGACGTCACCGCTCCTGTTCCAACCCC TCACCCTTCGTGGATTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSATTWSSDAIRMPCMAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLADGSGAVLIYTVPDRDVLNHL LEADPYPKTAVQVTSVREWKPNYHHHV
Sequences:
>Translated_107_residues MSATTWSSDAIRMPCMAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLADGSGAVLIYTVPDRDVLNHL LEADPYPKTAVQVTSVREWKPNYHHHV >Mature_106_residues SATTWSSDAIRMPCMAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLADGSGAVLIYTVPDRDVLNHLL EADPYPKTAVQVTSVREWKPNYHHHV
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11976; Mature: 11844
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTWSSDAIRMPCMAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLA CCCCCCCCCCEECCEEEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC DGSGAVLIYTVPDRDVLNHLLEADPYPKTAVQVTSVREWKPNYHHHV CCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure SATTWSSDAIRMPCMAVFIVETHYDPAHSEERMAARPAHLENLDVMRERGQLANAGPLA CCCCCCCCCEECCEEEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC DGSGAVLIYTVPDRDVLNHLLEADPYPKTAVQVTSVREWKPNYHHHV CCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA