| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ydiA [C]
Identifier: 50843493
GI number: 50843493
Start: 2224977
End: 2225861
Strand: Reverse
Name: ydiA [C]
Synonym: PPA2049
Alternate gene names: 50843493
Gene position: 2225861-2224977 (Counterclockwise)
Preceding gene: 50843498
Following gene: 50843492
Centisome position: 86.94
GC content: 61.92
Gene sequence:
>885_bases ATGGCAGAGTCGCCCCTGGAAATACACGTCATCGCTGATTCGACGGGTGAGACCGCCGTTCGTCTGGCTCGGGCCGCCCG CAGTCAGTTCGAGGGGGTCCATTGGCACATCGTGCGCCACCCCATGATCGGCACCGTCCCGGAAATGGTTTCGGCCCTTG AGGCTGTCTCAGAGGCTCACGAGGCTGGGCAGTGGGTGTGCGTTGTGCATACCTTGGTGCTGCCCGATATGCGCCGAATG GTCTCCGATGCGTGTGAAGAGATGGGCATTCGTGAGCTCGACCTTATGGGTCCGATGCTCGAGGCGATGGAGGAGGCCTC TGGCCTAGATGCCGACGCGGTACCGCGCCGTCCGGTGGGTGTTGAGGCCGACTATTTCACCCGGATCTCCGCGATGGAAT TCGCAGTCCGTAACGACGATGGCGCTATTCCCGACCGCCTGACCGAGGCTGATATTTGCCTGGTAGGTGTGAGCCGATCA GGAAAGACGCCGTTATCGATCTACCTGGGGTACTTAGGTTACAAGACGGTTAACGTCCCGCTGGTTCCTGGCATCGCTCC GCCGACCGAGCTCGCTGCGGTGGACCGATGGCGGATTGTTGGGTTGACGATTGACGCTCAGCGTCTGCTGGAAATCCGTG GTCGCCGAGTGCGTGGATTGGGCGGTTTCGGTAATGAGGACGGGTACGCGGACCTCGCCGCGATTTACGAGGAGCTGGAC GAGGTTGGCAAGATTCAGCGTCGGCTGGGGTGCCCCATCATTGACACGACCGGCCTGGCCTTGGAGGAGTCGGCGACGAA GGTCATTGACGTCGTTGATCAGCGAGCCAAGACGGCGGGTACCCGGTTGCGCAAGCCTGCGGGGTCGTATCGCATGCGCC CCTGA
Upstream 100 bases:
>100_bases GTTAACATTGTCTTGTTGGGATGTTTCCCCGCAGCTATGGATAGTCGTTGCGCGGTAGTGGCGGCATAGAGTCAGGGTGT GGCAGTCCTAAGATGGCGAC
Downstream 100 bases:
>100_bases CTGCGAAGAGTCACAGAGGTCGGAAGGCGTGATGGCGGCGGAGCTTGCGCTCGTCGTAATTCTGTGGTCCGTGCTTTCAC GCGCTGTGAGGAAGAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAESPLEIHVIADSTGETAVRLARAARSQFEGVHWHIVRHPMIGTVPEMVSALEAVSEAHEAGQWVCVVHTLVLPDMRRM VSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVGVEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRS GKTPLSIYLGYLGYKTVNVPLVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD EVGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP
Sequences:
>Translated_294_residues MAESPLEIHVIADSTGETAVRLARAARSQFEGVHWHIVRHPMIGTVPEMVSALEAVSEAHEAGQWVCVVHTLVLPDMRRM VSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVGVEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRS GKTPLSIYLGYLGYKTVNVPLVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD EVGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP >Mature_293_residues AESPLEIHVIADSTGETAVRLARAARSQFEGVHWHIVRHPMIGTVPEMVSALEAVSEAHEAGQWVCVVHTLVLPDMRRMV SDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVGVEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRSG KTPLSIYLGYLGYKTVNVPLVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELDE VGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=283, Percent_Identity=28.6219081272085, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2049_PROAC (Q6A651)
Other databases:
- EMBL: AE017283 - RefSeq: YP_056720.1 - GeneID: 2932288 - GenomeReviews: AE017283_GR - KEGG: pac:PPA2049 - NMPDR: fig|267747.1.peg.1997 - HOGENOM: HBG304855 - OMA: YANMDRI - ProtClustDB: PRK05339 - BioCyc: PACN267747:PPA2049-MONOMER - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 32085; Mature: 31954
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESPLEIHVIADSTGETAVRLARAARSQFEGVHWHIVRHPMIGTVPEMVSALEAVSEAH CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH EAGQWVCVVHTLVLPDMRRMVSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVG HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRSGKTPLSIYLGYLGYKTVNVP CCHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEECCE LVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD ECCCCCCCHHHHHCCCEEEEEEEECHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH EVGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AESPLEIHVIADSTGETAVRLARAARSQFEGVHWHIVRHPMIGTVPEMVSALEAVSEAH CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH EAGQWVCVVHTLVLPDMRRMVSDACEEMGIRELDLMGPMLEAMEEASGLDADAVPRRPVG HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VEADYFTRISAMEFAVRNDDGAIPDRLTEADICLVGVSRSGKTPLSIYLGYLGYKTVNVP CCHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEECCE LVPGIAPPTELAAVDRWRIVGLTIDAQRLLEIRGRRVRGLGGFGNEDGYADLAAIYEELD ECCCCCCCHHHHHCCCEEEEEEEECHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH EVGKIQRRLGCPIIDTTGLALEESATKVIDVVDQRAKTAGTRLRKPAGSYRMRP HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA