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The map label for this gene is yidE [C]

Identifier: 50843478

GI number: 50843478

Start: 2207318

End: 2208895

Strand: Reverse

Name: yidE [C]

Synonym: PPA2034

Alternate gene names: 50843478

Gene position: 2208895-2207318 (Counterclockwise)

Preceding gene: 50843479

Following gene: 50843476

Centisome position: 86.28

GC content: 61.15

Gene sequence:

>1578_bases
ATGACAGTACTGACCGACTTTCTTGCCACGCATCAACTGCTGACGATCCTGATCGTCCTGGCCTCCGGCGCCTTGCTAGG
CCAAATCAAGTTTGGCCCGTTGAGATTTGGTGCCGCTGGAGCCCTGTTTATGGGGCTGGTCGTCGGGGCCCTTGATCCTC
GCTTCGGTCAAAACCTGGGGATGATCAAAGGCCTAGGCGTCGTGCTGTTCTGCTACACCGTGGGCCTGGCTGCTGGATCG
ACCTTCTTATCTGACCTCAAACGTCAGTGGGGCCTCATGCTCGCCGGTGTCGTCGGGTTGGCAGTGATGGCCGCAGCTGG
ACTCGGCCTGGGGCGACTCTTCGGTTTAACCCCGGCTCACGTTGCGGGTCTGTACGCCGGTGTCCTCACCTCACCAGCCA
TTGACGCCGCATCGATGGCTACCCATGGAGCCGCAGATACTCTTGTGGGGTATGCGCTGTCCTATCCCGTGGGCGTCGTC
GTCGGGCTCATTATGGTCGCAATCATTGCTAAGAGATGCTGGCCGGCCAGCAAAGACAACACCTCAATGGCTGAGGCTGG
GCTTACCGCGGTGTCGACAGTCGTCGACCGGGAGACATCGATCCGGCAGACCCCTGGCTTTAATGACGACCAGGTTCGGA
TGTCCTATCTGCTGCGCGATGGCGAGATGCGATTGGCCACCCCCGACGACGATCTCCACGTCGGTGATCAGGTGCTGGTG
GTCGGAAACCCTGACGACGTCAATCGTGCTGTCGAGCACCTCGGGCACGTCTCCGAGCGCACCCTCACCAACGAGCGCAA
CGAGCTCGATTTCCGGCGCTTTGTGGTGTCCAACCCGGCCTTGGTGGGCCGCACCTTAGGCAGCATCGATGTGCGCGGAC
GTACCAGTGGCAAGGTGACGCGAGTACGTCGCGGTGACCTCGATATGTTGGCTCGCAGCGACATCGTCCTGCAGCCAGGA
GATCGGGTGCTGTGTGTTGTGCCAGCTCATCGCCTTTCCGACGCTGCGGACCTCTTTGGCGACTCTGAGGCTCGCGTCTC
CCAAGTGGATGCTCTGTCTTTGGGATTGGGTGCCGCTCTTGGCTTATTGCTCGGTGCCCTCATGGTGGCCCTGCCCAGGG
GGTTGCAGTTCGAGCTGGGAACCGCTGCTGGGCCGCTGGTCATGGGCATGATCTTAGGATCGATTCACCGCACGGGGCCG
CTGCGGTGGCAATTGCCGCACGCGACGAACGCGATTCTGCGTCAGCTCGGGCTCATGATCTTCCTGGCCTGCGTCGGGCT
GGCGTCCGGGCCAGCATTCTTGTCCCAGGCGGTGAGCGGGACGGGTCTGGCGGTTATTGCCGTCTCGGCTGTGACCCTGG
TCCTTGGTGGTGCGATCGTCATCGCAGCAGCCTGGTGTATGAAGCTTTCGGCCCAGCGCGCTACGGGTGCTTTTGCAGGC
TTCGTTGGTCAGCCCGCCATCCTTAGCTACGCCAACTCTCTCGTTAATGACGAACGGATCGAGTCGGCCTACGGTGCCCT
TTTCGCGTTAGGAACCGTCGTCAAAATCCTGCTAGTACAGGTGATTGTGCTGGTCTAA

Upstream 100 bases:

>100_bases
AGGCCTACAATTCAAGGGTTAAGTCCCGGATCGACCGGGATTGCTGCGACGGCGCATCCTGCCGTCGTGGCGGGAACGTC
GGCACGATGCCAGGAGCTTC

Downstream 100 bases:

>100_bases
ACAGCCTCGGGTCACCGCCTATCGGTCGTTTTACCCGATCGTTTACAAAGTCTGACGGCGCCGTGACACCCGCCACCCTA
GGCCCAGGACAGCCAGCCAG

Product: membrane protein (putative permease)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MTVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLGMIKGLGVVLFCYTVGLAAGS
TFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAHVAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVV
VGLIMVAIIAKRCWPASKDNTSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLV
VGNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVTRVRRGDLDMLARSDIVLQPG
DRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAALGLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGP
LRWQLPHATNAILRQLGLMIFLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAG
FVGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV

Sequences:

>Translated_525_residues
MTVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLGMIKGLGVVLFCYTVGLAAGS
TFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAHVAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVV
VGLIMVAIIAKRCWPASKDNTSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLV
VGNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVTRVRRGDLDMLARSDIVLQPG
DRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAALGLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGP
LRWQLPHATNAILRQLGLMIFLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAG
FVGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV
>Mature_524_residues
TVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLGMIKGLGVVLFCYTVGLAAGST
FLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAHVAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVVV
GLIMVAIIAKRCWPASKDNTSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLVV
GNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVTRVRRGDLDMLARSDIVLQPGD
RVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAALGLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGPL
RWQLPHATNAILRQLGLMIFLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAGF
VGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=523, Percent_Identity=28.6806883365201, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1787071, Length=514, Percent_Identity=28.5992217898833, Blast_Score=115, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2034_PROAC (Q6A666)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_056705.1
- ProteinModelPortal:   Q6A666
- GeneID:   2931957
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA2034
- NMPDR:   fig|267747.1.peg.1982
- HOGENOM:   HBG452396
- OMA:   TVYPLTM
- ProtClustDB:   CLSK2307674
- BioCyc:   PACN267747:PPA2034-MONOMER
- InterPro:   IPR006037
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 54630; Mature: 54499

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x147a9998)-; HASH(0x1466785c)-; HASH(0x13f15334)-; HASH(0x1499285c)-; HASH(0x1458f24c)-; HASH(0x14b313e4)-; HASH(0x140fa128)-; HASH(0x14b12d14)-; HASH(0x144ba3dc)-; HASH(0x14b312f4)-; HASH(0x144c11fc)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
MIKGLGVVLFCYTVGLAAGSTFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHH
VAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVVVGLIMVAIIAKRCWPASKDN
HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE
VGNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVT
ECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCEE
RVRRGDLDMLARSDIVLQPGDRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAAL
EEECCCHHHHHCCCEEECCCCEEEEEECCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGPLRWQLPHATNAILRQLGLMI
HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
FLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAG
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure 
TVLTDFLATHQLLTILIVLASGALLGQIKFGPLRFGAAGALFMGLVVGALDPRFGQNLG
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
MIKGLGVVLFCYTVGLAAGSTFLSDLKRQWGLMLAGVVGLAVMAAAGLGLGRLFGLTPAH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHH
VAGLYAGVLTSPAIDAASMATHGAADTLVGYALSYPVGVVVGLIMVAIIAKRCWPASKDN
HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TSMAEAGLTAVSTVVDRETSIRQTPGFNDDQVRMSYLLRDGEMRLATPDDDLHVGDQVLV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE
VGNPDDVNRAVEHLGHVSERTLTNERNELDFRRFVVSNPALVGRTLGSIDVRGRTSGKVT
ECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCEE
RVRRGDLDMLARSDIVLQPGDRVLCVVPAHRLSDAADLFGDSEARVSQVDALSLGLGAAL
EEECCCHHHHHCCCEEECCCCEEEEEECCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLLLGALMVALPRGLQFELGTAAGPLVMGMILGSIHRTGPLRWQLPHATNAILRQLGLMI
HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
FLACVGLASGPAFLSQAVSGTGLAVIAVSAVTLVLGGAIVIAAAWCMKLSAQRATGAFAG
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVGQPAILSYANSLVNDERIESAYGALFALGTVVKILLVQVIVLV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA