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The map label for this gene is ycdH [C]

Identifier: 50843470

GI number: 50843470

Start: 2198152

End: 2198820

Strand: Reverse

Name: ycdH [C]

Synonym: PPA2025

Alternate gene names: 50843470

Gene position: 2198820-2198152 (Counterclockwise)

Preceding gene: 50843471

Following gene: 50843469

Centisome position: 85.88

GC content: 61.29

Gene sequence:

>669_bases
ATGGACGAATGGGCGTGTCATGGCCGCCATCGCGTGGATCGTCGTGGCAGCAGTCTCGGCTCTCAACGTGGTTCTCGTCG
TCGAGACGGTCATGGGTGCATGATCCTTGAGGGCAGTTTTCTGGCGACAATCGTGAAAATGAGTGACAAACTCAAGCGGG
TGACGACGCCGAACCCCGCACCGACCTCTGCCCACGAGCTAGCCAACGATTTGGCCACTGCATTTCGCGGGTACCCTGCT
GGAGTGGCGATCCTCACGACGATGGGAGCGGCTGGGCCCGAGGGCTTGACGGTCTCCTCCCTGGCGTCGGTGTCAGTCGT
CCCGGCTGTTGTGTCGGTGTCGTTGGGTAATGGTTCGACGACCCTGGCCACCCTGACGGAGGAGTCCCGCGTCATCGTCC
ACATGCTTGATGCAGATCGCGCGGACCTCGCTGATGACTTCGCTGTGCCAGGGGCCGATCACTTTGCCGGCACCGAGTGG
GCGCCGAGCGCTGAGGGAGCACCCCGGTTAGAGATGCAGGGGCCCATTTTGCATGGTTTCGTTCAGTCAATGACTGATAC
CGGATCGGCCACACTCATCGCGGTAACGATTGATCGGATCGAAGCTGGGAATTGTCATGCCCCGGGGTTGGTGAGGATGG
CTCGGGAGTGGCACGAGATCCCTCGCTAA

Upstream 100 bases:

>100_bases
CTCAGGCCCTCGTCTGGAGCCAGGTGCTGTTGAGCATGGGGTTGCCGCTCGTGTTGGTGCCGTTGGCTCGGTTCACCGGC
GATCGGCGGCTGATGGGCCA

Downstream 100 bases:

>100_bases
ACCTTTCGTGACCCACGTTTTCGGGTACGTTGGAAGACGTCATCGAAGTCGAAGGAGATGTCGCCATGACAGCCACTAAT
GCGCGCGCTCAGCAGACTGA

Product: hypothetical protein

Products: NAD(+); reduced flavin [C]

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDEWACHGRHRVDRRGSSLGSQRGSRRRDGHGCMILEGSFLATIVKMSDKLKRVTTPNPAPTSAHELANDLATAFRGYPA
GVAILTTMGAAGPEGLTVSSLASVSVVPAVVSVSLGNGSTTLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEW
APSAEGAPRLEMQGPILHGFVQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR

Sequences:

>Translated_222_residues
MDEWACHGRHRVDRRGSSLGSQRGSRRRDGHGCMILEGSFLATIVKMSDKLKRVTTPNPAPTSAHELANDLATAFRGYPA
GVAILTTMGAAGPEGLTVSSLASVSVVPAVVSVSLGNGSTTLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEW
APSAEGAPRLEMQGPILHGFVQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR
>Mature_222_residues
MDEWACHGRHRVDRRGSSLGSQRGSRRRDGHGCMILEGSFLATIVKMSDKLKRVTTPNPAPTSAHELANDLATAFRGYPA
GVAILTTMGAAGPEGLTVSSLASVSVVPAVVSVSLGNGSTTLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEW
APSAEGAPRLEMQGPILHGFVQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR

Specific function: Catalyzes The Reduction Of Free Flavins (Fmn, FAD And Riboflavin) By NADH (By Similarity). [C]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.8.- [C]

Molecular weight: Translated: 23433; Mature: 23433

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEWACHGRHRVDRRGSSLGSQRGSRRRDGHGCMILEGSFLATIVKMSDKLKRVTTPNPA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCC
PTSAHELANDLATAFRGYPAGVAILTTMGAAGPEGLTVSSLASVSVVPAVVSVSLGNGST
CCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCE
TLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEWAPSAEGAPRLEMQGPILHGF
EEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR
HHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDEWACHGRHRVDRRGSSLGSQRGSRRRDGHGCMILEGSFLATIVKMSDKLKRVTTPNPA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCC
PTSAHELANDLATAFRGYPAGVAILTTMGAAGPEGLTVSSLASVSVVPAVVSVSLGNGST
CCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCE
TLATLTEESRVIVHMLDADRADLADDFAVPGADHFAGTEWAPSAEGAPRLEMQGPILHGF
EEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VQSMTDTGSATLIAVTIDRIEAGNCHAPGLVRMAREWHEIPR
HHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; flavin [C]

Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA