| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is brnQ [H]
Identifier: 50843467
GI number: 50843467
Start: 2194985
End: 2196343
Strand: Direct
Name: brnQ [H]
Synonym: PPA2022
Alternate gene names: 50843467
Gene position: 2194985-2196343 (Clockwise)
Preceding gene: 50843464
Following gene: 50843472
Centisome position: 85.73
GC content: 63.87
Gene sequence:
>1359_bases ATGTCCGATCTGCGAACCGTCCCCAAGCACACCGCCCTCCTCATCGGGCTCATGATATTTGGGCTATTTTTCGGCGCCGG AAACCTCATCTTCCCGGTCGAGCTAGGGCGCCTCGCCGGCCACAGCGCCCCCGTAACCGCCGCAGGATTTCTCGTCACCG CAGTCGGGATCCCCATCGTGGCCATCATCTCTTCCGCCGTGTCGGGATGCTCCAGCGTCCACGGCATGACCTCGCGGGTG TCCTCTCAATACGCCACGATCTTCACCTGCCTGCTGTACCTGACCATCGGCCCAGCCTTCGCCATCCCGAGAACGGCGAC CGTCTCCTACGAAGTCGGCGTGGCGCCCTTTATCCAAGGCCACGGCCCGGCACTGCCGATCTTCACCATCGTGTTCTTCG CGATGACTCTGGTCGCAGCCCTCAAACCCGGAAAGCTCATGGACTGGGTAGGGCGATATCTGACCCCACTGTTCCTTGCC CTGCTAGCCATCCTCATCGTGGCAACCCTCATCCATCCCATGCCCACCGTCGCGAATCGTCCCCCGCAGCCCCCGTACGA TCACCAGCCCTTCATGCACGGCTTCCTCGACGGCTACAACACCATGGACGCGCTGGCGTCCCTCGCCTTCGCCATCGTCA TCATTGAAGCAATCAATCAACGCGGCTCGACGGGCCGTCGCGATGTCACCCATATCACAATCCGCGCCGGGCTGGTTGCC ACCATCCCGCTGACCCTCGTCTACGTATCCCTGGCATGGCTCGGGCGCACGTCCACCCTCGTCGTCCCTAACGCTGCCAA TGGCGGCGTCGTCCTGGCTGGGGTTTCACGCCACTACTACGGCACGGCCGGTCAGGTGTTGATAGCCGCCATCGTGCTGG TAGCCTGCCTCAAAACAGCGATCGGTTTGGTCGTGGCCTGTGCCGAGATCTTTCGTCGCATGTTCCCGGCGGGGCCGTCA GTGCGAAGCTGGGTCGTCATCTTCAGCGTGGCGTCAGCCATCATCGCCAACGCCGGTCTGACGACGATCATCGCCTGGTC GACCCCCGTCCTCATGTTCCTCTACCCGTTGGCAATCACGGCGATCATTTTGGGGCTGCTTGACCCGTGGCTGGGTGCCA GCCGCCTCCCCCACCGCATCATGACCGGATGCGTCGTCCTGGCTGCCCTGCCAGACCTGGTGCGCGCCCTGCCGATCCAA GGGTCAGGAACCCGCGCTATCACCCACGTGGCCGACATGGTCCTACCCTGGGCGTCCGACGGTCTCGGTTGGGGGCTTCC CGCCATTATCGGTCTGGCCGCCGGTTGGGGAGCCAGTCTCATCTTGGGTCGCCCCCGTCGTTGGGGCACGAGTAGCTGA
Upstream 100 bases:
>100_bases TCCCAATTGTCAGATGACACGAACGACCCTCAGATGAACGCTCGTTCTCACCTATAGGAAAAGCGGAAGCTACCGCCACC ACCCTGGCAAGATATTCCCC
Downstream 100 bases:
>100_bases GTGGCTTTACGCTTGCGAGAGCAAGTCTTCGAGCTTGACCAGGGTGTCGTGCCAGTCGTCGACCGCGACGCACGGAATAC CCATCGCCTTGACAGGATAG
Product: branched-chain amino acid transport permease
Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: Branched-chain amino acid uptake carrier [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIVAIISSAVSGCSSVHGMTSRV SSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQGHGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLA LLAILIVATLIHPMPTVANRPPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRRDVTHITIRAGLVA TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTAIGLVVACAEIFRRMFPAGPS VRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAITAIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQ GSGTRAITHVADMVLPWASDGLGWGLPAIIGLAAGWGASLILGRPRRWGTSS
Sequences:
>Translated_452_residues MSDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIVAIISSAVSGCSSVHGMTSRV SSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQGHGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLA LLAILIVATLIHPMPTVANRPPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRRDVTHITIRAGLVA TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTAIGLVVACAEIFRRMFPAGPS VRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAITAIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQ GSGTRAITHVADMVLPWASDGLGWGLPAIIGLAAGWGASLILGRPRRWGTSS >Mature_451_residues SDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIVAIISSAVSGCSSVHGMTSRVS SQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQGHGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLAL LAILIVATLIHPMPTVANRPPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRRDVTHITIRAGLVAT IPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTAIGLVVACAEIFRRMFPAGPSV RSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAITAIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQG SGTRAITHVADMVLPWASDGLGWGLPAIIGLAAGWGASLILGRPRRWGTSS
Specific function: Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine) Which is coupled to a proton motive force [H]
COG id: COG1114
COG function: function code E; Branched-chain amino acid permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the branched chain amino acid transporter family [H]
Homologues:
Organism=Escherichia coli, GI1786601, Length=416, Percent_Identity=37.2596153846154, Blast_Score=250, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004685 [H]
Pfam domain/function: PF05525 Branch_AA_trans [H]
EC number: NA
Molecular weight: Translated: 47518; Mature: 47387
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIV CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH AIISSAVSGCSSVHGMTSRVSSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCHHCCC HGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLALLAILIVATLIHPMPTVANR CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC PPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRRDVTHITIRAGLVA CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTA HHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHH IGLVVACAEIFRRMFPAGPSVRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAIT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHH AIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQGSGTRAITHVADMVLPWASD HHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC GLGWGLPAIIGLAAGWGASLILGRPRRWGTSS CCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCC >Mature Secondary Structure SDLRTVPKHTALLIGLMIFGLFFGAGNLIFPVELGRLAGHSAPVTAAGFLVTAVGIPIV CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH AIISSAVSGCSSVHGMTSRVSSQYATIFTCLLYLTIGPAFAIPRTATVSYEVGVAPFIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCHHCCC HGPALPIFTIVFFAMTLVAALKPGKLMDWVGRYLTPLFLALLAILIVATLIHPMPTVANR CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC PPQPPYDHQPFMHGFLDGYNTMDALASLAFAIVIIEAINQRGSTGRRDVTHITIRAGLVA CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH TIPLTLVYVSLAWLGRTSTLVVPNAANGGVVLAGVSRHYYGTAGQVLIAAIVLVACLKTA HHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHH IGLVVACAEIFRRMFPAGPSVRSWVVIFSVASAIIANAGLTTIIAWSTPVLMFLYPLAIT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHH AIILGLLDPWLGASRLPHRIMTGCVVLAALPDLVRALPIQGSGTRAITHVADMVLPWASD HHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC GLGWGLPAIIGLAAGWGASLILGRPRRWGTSS CCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8544834 [H]