Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 50843411

GI number: 50843411

Start: 2127186

End: 2128112

Strand: Reverse

Name: ycjP [C]

Synonym: PPA1964

Alternate gene names: 50843411

Gene position: 2128112-2127186 (Counterclockwise)

Preceding gene: 50843412

Following gene: 50843405

Centisome position: 83.12

GC content: 58.58

Gene sequence:

>927_bases
ATGACTAGTACAGCGCTTCCGGATGAGGTACGTGGTGACGCTACTGTTCCCGGTGGGACCCTGGCTGACGCCCCTCAACG
TCGCCGGCGTCGCACGGCGGCCCAGCAGACTATGAGCGCCGTGCGCTATGTGCTGCTGGTGATTTTCGCCGTGCTGGTGC
TGACCCCTGCCTATGCCTTGCTCGTGACGAGCTTCAAGACGCCGTCTGTCTACGACCAAACGACGGCGTGGAAATTCCCT
AGGGTGTGGTCAGTTGGAGGCTGGCAGGCCGCCTGGGGCGCCCTGGCGCCAGCTCTAGGACGTTCTCTCGTGATGGCCGT
ACTGGCCGCCATCATCTCTGCCATTCTGGGATCCCTCAACGGCTATGTCTTCGCGAAGTGGAAGTTCCCTGGATCCCATG
TGATCTTTGTGCTGTTCCTGTTCGGGATGTTCATTCCCTACCAGGCCATCATGATTCCGCTGTCAGGCATGATGTTAGAC
ATTCAGCAGGGAGCTCCGTGGTTCGCCGGGATCCCGACCCTAGTGCTGTGCCACGTCGTGTATGGCATCCCCATTTGCAC
TCTGATCTTCCGCAACTACTATGCGACCGCAGTGCCCTCGGAAATAGTCGAGGCCTCCAGAGTGGACGGCGCTGCCATGA
TCTCGACGTACACCAAGATCGTCCTACCGGTGTCCATTCCAGGCTTCGTCGTGACGCTCATTTGGCAGTTCACCAGTGCC
TGGAACGACTTCCTCTTTGCGCTGTTCCTGACTAACCAGAACAACGGGCCGGTCACCTTCGGCCTCAATGCGTTGGCTTC
CGGACAGAACCCGAATTATCCGCAGATCATGGCTGGTGTGCTCATTGCCTGTTTGCCGACCGTTGTGGTGTACATCGCCC
TGGGTAAGTACTTCGTCTCTGGCCTCATGAGCGGTTCGGTCAAATGA

Upstream 100 bases:

>100_bases
CGGCGGGTGCCGTCAACGCGACGATCCTGCTGGTCATTGTGGCCGTTGTCGTCGTCCCGTACCTCGTGTACACCAATCGC
ACCGAGAGACAAGGACGCTG

Downstream 100 bases:

>100_bases
GGTTAGGAAAGGCGCTGACGCGACCTCGTCATTTGCAAGGTGGCCGGGACCGGGGTCGAACCGGTGACCTTTCACTTTTC
AGGCGAACGCTACTACCAAC

Product: binding-protein-dependent transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYALLVTSFKTPSVYDQTTAWKFP
RVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLNGYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLD
IQQGAPWFAGIPTLVLCHVVYGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA
WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVSGLMSGSVK

Sequences:

>Translated_308_residues
MTSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYALLVTSFKTPSVYDQTTAWKFP
RVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLNGYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLD
IQQGAPWFAGIPTLVLCHVVYGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA
WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVSGLMSGSVK
>Mature_307_residues
TSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYALLVTSFKTPSVYDQTTAWKFPR
VWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLNGYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLDI
QQGAPWFAGIPTLVLCHVVYGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSAW
NDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVSGLMSGSVK

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=287, Percent_Identity=26.1324041811847, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789860, Length=211, Percent_Identity=23.696682464455, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790464, Length=268, Percent_Identity=24.6268656716418, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33301; Mature: 33169

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYAL
CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTSFKTPSVYDQTTAWKFPRVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLN
HHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLDIQQGAPWFAGIPTLVLCHVV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHCHHHHHHHHHH
YGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVS
HHHHHEEHEEECCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMSGSVK
HHHCCCCC
>Mature Secondary Structure 
TSTALPDEVRGDATVPGGTLADAPQRRRRRTAAQQTMSAVRYVLLVIFAVLVLTPAYAL
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTSFKTPSVYDQTTAWKFPRVWSVGGWQAAWGALAPALGRSLVMAVLAAIISAILGSLN
HHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYVFAKWKFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLDIQQGAPWFAGIPTLVLCHVV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHCHHHHHHHHHH
YGIPICTLIFRNYYATAVPSEIVEASRVDGAAMISTYTKIVLPVSIPGFVVTLIWQFTSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
WNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLIACLPTVVVYIALGKYFVS
HHHHHEEHEEECCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMSGSVK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]