| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843405
Identifier: 50843405
GI number: 50843405
Start: 2118266
End: 2119399
Strand: Reverse
Name: 50843405
Synonym: PPA1957
Alternate gene names: NA
Gene position: 2119399-2118266 (Counterclockwise)
Preceding gene: 50843411
Following gene: 50843404
Centisome position: 82.78
GC content: 62.43
Gene sequence:
>1134_bases ATGGGTCAAGGACGCTCCGACGGCGCTGAACAGCTTGGCGGCAGGTCGCTGACCGACTTGCGCGATCACAACCAGGCGGC AGTACTGGATTGTCTGGTAACGGCAACTCAACCCGTGACAATCCGACGTCTCCAGGAGCTCACCGGTCTGACCCGCCCCA CCGTCAGTGCCGCCATGAACTCGCTCCTAGAACAGGGTGATGCCCTCGAGCAGGAATCGATGCACGCCGGGGGCAGGGGA GGGCGTCGCTCCCGGATGTTTACGCTGAACGCCACGAAGAGAGTTCAGGCCGGGGCGGCCATCCGATTGCAGGACGTCGA GCTAGGCCTGGCTGACTGGCACGGTGAGATGTTGATCAGCACGTCGCGACCTCTACGTGGCGGCTCCCCCGGTGCTTTGC TCGATGAAGCCCTCGACGACCTGCTACAAGAGCTGGGCCTGGATTCCGTTGACACGATGGTCATTGGTGCTCTTGGTAGC GTCGGACCCGACGGTCGGTTGCGTCACAACGAGTCCCTGCCAGAAATTTCTGACCCTGACCACTTCACTGCTCTTCATGA CGGGCGTGTGGGTAATGTCATGATCGAGAACGACGCAGTACTCGCTGCTCTGGCCGAGCAGCATGTGCGTGGCCTGGCAG ACACAGAATCGATGGTCTCGCTGCTCATCGATGCCTCGGTGGGAGCGGGAATCATCCTCGACGGACGCGCTATTCGCGGT TCTGCCGGGTATGCCGGTGAAATGAGTTATCTGCCAGGGGCAGGGTGGGCCACTGCGCACTTGGATCTGGTCGACGCTGC TGCCAGGCACGACGTCTCGGCCGAGGCATTGTTCGAACTTGCTGGATCACCGCACGCCCCCGTCTGGGCTGAGCAGGCCG TCGACGCTTTTGCCGACGCCATCGTCCCGGGGGTTGCTGCACTGTTGGCTGCCCTCGATCCTGGACTATTGGTTATTGGC GGCCATGCTCGCCCCGCCCATGTTCGCATCGCTCGCCGGTTGCGGGCCAGTCTTCGCGACGATCTACCTCATCTGCCATG CATTGAGGCGTCCCGAGCGGGTGCTCATGCTGTGGTCCAAGGAGCTGTGGAGCTTGCGTTGGCACAGCCGGAGGCCTCGA CTCGACAAGTCTGA
Upstream 100 bases:
>100_bases ACGGTGTCCACGATGTTTAGAAAGAGTAATTCGTAACTCAATCTGAGGCAAGTAAGCTGAGCCTGAAAATGGACGAATCT TCGTGGAAAGCTGGTTCCTG
Downstream 100 bases:
>100_bases GCGCGGGTCTGACGGAGTTCCGAAAGAGATCTTGACAACTCTGGCGTGACGGCGTTGACTGTCACATGCCATTGGAGCCG ACGACATGGTCGGCACGTCA
Product: ROK family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; ROK Family Protein; ROK-Family Transcriptional Regulatory Protein; Rok Family Protein; ROK Family Transcriptional Regulator; ROK Family Regulatory Protein/Kinase
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MGQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMNSLLEQGDALEQESMHAGGRG GRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLISTSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGS VGPDGRLRHNESLPEISDPDHFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADAIVPGVAALLAALDPGLLVIG GHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQGAVELALAQPEASTRQV
Sequences:
>Translated_377_residues MGQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMNSLLEQGDALEQESMHAGGRG GRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLISTSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGS VGPDGRLRHNESLPEISDPDHFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADAIVPGVAALLAALDPGLLVIG GHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQGAVELALAQPEASTRQV >Mature_376_residues GQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMNSLLEQGDALEQESMHAGGRGG RRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLISTSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGSV GPDGRLRHNESLPEISDPDHFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRGS AGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADAIVPGVAALLAALDPGLLVIGG HARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQGAVELALAQPEASTRQV
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39394; Mature: 39263
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMN CCCCCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH SLLEQGDALEQESMHAGGRGGRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLIS HHHHCCCCHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCEEEEEEEEECHHHCCCCEEEE TSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGSVGPDGRLRHNESLPEISDPD CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC HFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG CEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCEEEC SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH IVPGVAALLAALDPGLLVIGGHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQ HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH GAVELALAQPEASTRQV HHHHHHCCCCCCCCCCC >Mature Secondary Structure GQGRSDGAEQLGGRSLTDLRDHNQAAVLDCLVTATQPVTIRRLQELTGLTRPTVSAAMN CCCCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH SLLEQGDALEQESMHAGGRGGRRSRMFTLNATKRVQAGAAIRLQDVELGLADWHGEMLIS HHHHCCCCHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCEEEEEEEEECHHHCCCCEEEE TSRPLRGGSPGALLDEALDDLLQELGLDSVDTMVIGALGSVGPDGRLRHNESLPEISDPD CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC HFTALHDGRVGNVMIENDAVLAALAEQHVRGLADTESMVSLLIDASVGAGIILDGRAIRG CEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCEEEC SAGYAGEMSYLPGAGWATAHLDLVDAAARHDVSAEALFELAGSPHAPVWAEQAVDAFADA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH IVPGVAALLAALDPGLLVIGGHARPAHVRIARRLRASLRDDLPHLPCIEASRAGAHAVVQ HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH GAVELALAQPEASTRQV HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA