| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843364
Identifier: 50843364
GI number: 50843364
Start: 2074564
End: 2075493
Strand: Reverse
Name: 50843364
Synonym: PPA1913
Alternate gene names: NA
Gene position: 2075493-2074564 (Counterclockwise)
Preceding gene: 50843370
Following gene: 50843363
Centisome position: 81.07
GC content: 57.96
Gene sequence:
>930_bases ATGTTCACCGTTGACGTTGTCAAGATCGTCGGGTTGAGCCTGTTGCGTCATAGTGTTCGCAATGTGTCTTTCCAGCGATT CTTGGTGGGGATAGCAGCCATCTTGCTTCTCCTGCCCACTGCGTGCTTTCGACAAGATGATGCGCAGGCACCCGTTGTCG ATAACCTCGGTACGGTCTTCAGCCCCTCGAACTCTCTCATTCGCGAGCCGACGAACTCGTCAGCCACTGGGACGCTCAAG AGCACATATGAGTACCTCCGGCTCATCGACGGTCACGATCTACCCGACGACGATGGCTACGCTCATGATCATCTGGTCGC GGCTTTGCGCCCGTATTTGGTGAATGGTGGAGACAGTCGGCAGGCCCACGTCAACCAACTCATGGCGGCGTCATCCCTGA AAACCCTCAACGCGTTGTCCGACAAGGAGAGATCAGAGGTCGACAAACGTACCCGCCTGCCGAAGGGCTGCATCACGAGA AAGACGGTGATGACGGATCTGCCCATCGCGACGATGAGGCGGGAGATCGGCCTGTCCAACGACGGGTTGTGCCTCACACC GTGGAAGGTCAAGACGACTTCTTCCGAGGAAGCTCGGTGGGCGATGCAGGCGCTGGCCAGTGCCGACCTATTCAGCAATG CTAAGGACGCCGAGAAATGGGGGTGGGAGTCGATCTCGGACGGGTATTTGCGCCATCTCGAGACCTACAGTGGCCCGAGT ACGACTATCGCGATGGCCTTGTCGGCGGCGAATACCGTCTCTACATTGTCTCGTTCCCAGTTGCAACGCATCGGCGACAG TCTCGCGGATGCGCCATGTCCGAGGAAGGACCTTGGTCCGGCGCTCATTCGCAATGGAAAGCCGGTCAAGGACAAGTGCA GTATCGAATCGGCGTACCTGTTGAGGTATTCCGGGAATTGGGCGTGGTGA
Upstream 100 bases:
>100_bases TACGTGGGTCACAAGTTGCGAGTGTTTTCGATGTTTTTCTGTTGACTTCGTCACATCAGGGCACAGCTGTTAGCCCAGTT TCAATGCCGGCTTGACAAGC
Downstream 100 bases:
>100_bases CATGACGGTTTCTTGGCAAGGTGTGACCAAGACATTCCCCTCGGGCGATTCCGCGCGTGGGGGGGGGGTGCACGATTCAT TGCGCCGATGCGACTGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVFSPSNSLIREPTNSSATGTLK STYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSRQAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITR KTVMTDLPIATMRREIGLSNDGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYLLRYSGNWAW
Sequences:
>Translated_309_residues MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVFSPSNSLIREPTNSSATGTLK STYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSRQAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITR KTVMTDLPIATMRREIGLSNDGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYLLRYSGNWAW >Mature_309_residues MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVFSPSNSLIREPTNSSATGTLK STYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSRQAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITR KTVMTDLPIATMRREIGLSNDGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYLLRYSGNWAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33896; Mature: 33896
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC SPSNSLIREPTNSSATGTLKSTYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH QAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITRKTVMTDLPIATMRREIGLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCC DGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS CCEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCC TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCHHHCCCEEEE LRYSGNWAW EEECCCCCC >Mature Secondary Structure MFTVDVVKIVGLSLLRHSVRNVSFQRFLVGIAAILLLLPTACFRQDDAQAPVVDNLGTVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC SPSNSLIREPTNSSATGTLKSTYEYLRLIDGHDLPDDDGYAHDHLVAALRPYLVNGGDSR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH QAHVNQLMAASSLKTLNALSDKERSEVDKRTRLPKGCITRKTVMTDLPIATMRREIGLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCC DGLCLTPWKVKTTSSEEARWAMQALASADLFSNAKDAEKWGWESISDGYLRHLETYSGPS CCEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCC TTIAMALSAANTVSTLSRSQLQRIGDSLADAPCPRKDLGPALIRNGKPVKDKCSIESAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCHHHCCCEEEE LRYSGNWAW EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA