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The map label for this gene is 50843354

Identifier: 50843354

GI number: 50843354

Start: 2062001

End: 2062585

Strand: Reverse

Name: 50843354

Synonym: PPA1902

Alternate gene names: NA

Gene position: 2062585-2062001 (Counterclockwise)

Preceding gene: 50843355

Following gene: 50843353

Centisome position: 80.56

GC content: 64.62

Gene sequence:

>585_bases
ATGACGACCAGCGATGTCCCTGCAATCGGCTGGCACGACGCTGTTGCCCAGGCGGTGTCCACTCACCCGTGGCTGGCTCA
TCTGACGGCCATCGACGGGACAGGGGAGCGCGGCCAGGATCCCGACATCATCGTGGTTTGTCGCCTCGAGAATCATGACG
GCGACGACGTGACTATCTCCACCCGTGTGCCTCGTGACGGCGGGACCTTGGACTCGATTGTCGGCGTGCTGGCCGGGGCA
TCCTGGTATCAGCGGGAGATCCACGACTTTTTTGGTGTGAGGTTTGTCGGCCCTGGGGCAGATGATCGTGCCCTCCTTGT
CCACGATGCACCGAAACCGCCCCTGCGCAAGGAAGCTGTGTTGGCGCAGCGAGCTGACACCGTGTGGCCGGGTGCGGCTG
ACCAGGCTGGCTCGAAGTCCGCGAGTCGACGTCTGCCGGTCGGCGTTCCTGACCCTGAGACGTGGCGGCGTATCAAAGAC
GGTGAGGATATTCCGGATGCCGAGGTCATCGCGGCCATGTCTGGCCGGCGCCCGCGATCAGCTGCCCGTCGAATGGCAAG
CACGGCGTCAGGCAGGCAGGCATGA

Upstream 100 bases:

>100_bases
GACTTCCGGATGCGGGGGTCGACGCCGATCACTGGATTCCGGGCTGTCCCCCCGGACCTGAAACGCTCACCGGGTTGTTG
GCCTCGTCCCGGGAGGCCGC

Downstream 100 bases:

>100_bases
GACATTCGGCTATCAACCTTGACGTCGACGCGTGCACCTCCTGCATGATCTGTGCCCGCGAGTGTCCGGCTTGGTGCATC
ACCATCGACGCTCACCACGA

Product: NADH dehydrogenase subunit

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH Dehydrogenase Subunit; NADH Dehydrogenase Subunit C; NADHUbiquinone Oxidoreductase

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTRVPRDGGTLDSIVGVLAGA
SWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAVLAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKD
GEDIPDAEVIAAMSGRRPRSAARRMASTASGRQA

Sequences:

>Translated_194_residues
MTTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTRVPRDGGTLDSIVGVLAGA
SWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAVLAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKD
GEDIPDAEVIAAMSGRRPRSAARRMASTASGRQA
>Mature_193_residues
TTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTISTRVPRDGGTLDSIVGVLAGAS
WYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAVLAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKDG
EDIPDAEVIAAMSGRRPRSAARRMASTASGRQA

Specific function: Unknown

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20782; Mature: 20651

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTIS
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEE
TRVPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAV
EECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCCEEEEECCCCCCHHHHHH
LAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKDGEDIPDAEVIAAMSGRRPRS
HHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHH
AARRMASTASGRQA
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TTSDVPAIGWHDAVAQAVSTHPWLAHLTAIDGTGERGQDPDIIVVCRLENHDGDDVTIS
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEE
TRVPRDGGTLDSIVGVLAGASWYQREIHDFFGVRFVGPGADDRALLVHDAPKPPLRKEAV
EECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCCEEEEECCCCCCHHHHHH
LAQRADTVWPGAADQAGSKSASRRLPVGVPDPETWRRIKDGEDIPDAEVIAAMSGRRPRS
HHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHH
AARRMASTASGRQA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA