Click here to switch to the map view.

The map label for this gene is 50843172

Identifier: 50843172

GI number: 50843172

Start: 1863645

End: 1864064

Strand: Reverse

Name: 50843172

Synonym: PPA1710

Alternate gene names: NA

Gene position: 1864064-1863645 (Counterclockwise)

Preceding gene: 50843174

Following gene: 50843167

Centisome position: 72.81

GC content: 60.48

Gene sequence:

>420_bases
ATGAATGCCAGGGCAGCGGTCGCGGTGACGGTTCTGCTCGTCGTGGCAGGGTGTGCTCCTTCACACGGGGGAGCCGTGCC
GAGCCCTTCTGCTGCATCCGCTACCCCGGCTCCTGCCGGTGCGGAGACGCTGGCGAATCTGGGGTTTAAATATGGCCCCC
GGAATTTCCGGCTGCCCAAGGGACTGGCCGTCACGTTACGGGTTGATCACGTCAACAACATCACCCTGCTTACTGGGCCG
GATACGTCGGGTAAAGTACACGATTTTCTGGCCGATAATCTGTCGGCATCGGGTTTTACAGTGACGGGAAACGCCAACGG
ATCGTTGACTTTCATCTCGAATCGCGGCGACACCAAGGGGTGGAGTGGAGGCTTCACCAGTTCCGACGAGGCGGCGGGGC
TGACTTTGCGTCACGGTTGA

Upstream 100 bases:

>100_bases
AGCGCCCCGCCCGCGCCCCTGACAGTGCGATCCATGCTGTGTGTCGTGCCTGATACTGCATGACCAGGTGTAAGGGACGA
TCAGCGATAGCATCGTCGGC

Downstream 100 bases:

>100_bases
AGCTGTGGAAGGTACAGGGCGGGACATGACACATATTAATAATCCATACAGTTCGTCTCGTGTGACTCGGAACCATCGGT
GTAGTAATTGCTGTCACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPKGLAVTLRVDHVNNITLLTGP
DTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKGWSGGFTSSDEAAGLTLRHG

Sequences:

>Translated_139_residues
MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPKGLAVTLRVDHVNNITLLTGP
DTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKGWSGGFTSSDEAAGLTLRHG
>Mature_139_residues
MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPKGLAVTLRVDHVNNITLLTGP
DTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKGWSGGFTSSDEAAGLTLRHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13945; Mature: 13945

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCC
GLAVTLRVDHVNNITLLTGPDTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKG
CEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCC
WSGGFTSSDEAAGLTLRHG
CCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MNARAAVAVTVLLVVAGCAPSHGGAVPSPSAASATPAPAGAETLANLGFKYGPRNFRLPK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCC
GLAVTLRVDHVNNITLLTGPDTSGKVHDFLADNLSASGFTVTGNANGSLTFISNRGDTKG
CEEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCC
WSGGFTSSDEAAGLTLRHG
CCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA