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The map label for this gene is lytR [H]

Identifier: 50843161

GI number: 50843161

Start: 1851527

End: 1852810

Strand: Direct

Name: lytR [H]

Synonym: PPA1699

Alternate gene names: 50843161

Gene position: 1851527-1852810 (Clockwise)

Preceding gene: 50843159

Following gene: 50843162

Centisome position: 72.32

GC content: 62.15

Gene sequence:

>1284_bases
ATGTCTTATCGAGGCACTGGGCGCAGGCCCCGCGACGAGCAATCTCGTCAGTCTGACCTGGACTGGCTATACGGGGTTGA
CGAAAACGACGCCACTCGTATCGATCCAGTGAACCCGCCGCGCGGCACGTCCGATAGGACGGGTCGTCCACGGACAGACC
GGCGCCCCCAGCCCCGTCAAGGTGCACGTCGCTCCTCCTCCCAGCAATCCCCACAACCGCGACCCTCTCGGCGTCCTCCT
GCTGAGCTGTACGGATCCGATGGCCAACGACGCCCACCGCGTCAGGCCCGACAGCGGCGGCAGGCCGCGAGTCACCCAGC
GCCACGCGCACGTCGACGTCGGCATCCCTTCAAGGTCGTCATAGTGCTGTTGTTGGCATGGGTGGTGTGGCTCGTCGCGG
TGCCGTCATATGCCCTAGGCCATACTGGAACGGTGGACGCCACTCCAGACGGACCACGAGGCGCAGATCACCCGGGCACC
CTCGTACTGCTGGTCGGCACCGATGAGCGGCAGAATCTCACGCCCAGGCAACAGAAGCAATTGGGCACCGGCACCGAAGC
CGGTCTGCGCACCGACACCATGCTGCTGCTCTACATGCCACCAGAAGGCAAGGATGTCCTCATCTCCCTGCCGCGAGATA
CGTTCCTGCGCATTCCCGGGCATCATCACAACAAGCTCAATGCTGCCTACTCGATGGGCGGAGCGAAGTTGCTCGTTCAG
ACAATTGAAAAGGCCACTAACCTGCGCATCAGCGGTTACGTCGAGATTGGATTCGGTGGGTTCGTCCAAATGGTCGACGC
GGTCGGCGGGGTTCATGTAACCCTCAACAAGCCAATGGTCGACAAGGACTCTCACACGAACCTTCCTGCCGGCCCCCAGA
ACCTCGATGGGGTCCAGGCCCTCGGGTACGTGCGGATGCGTAAGGCCGACGCGGAAGGAGACCTAGGCCGCGTCAAAAGG
CAGCAGCAGGTGGCCGCCCAGGTGGCCAAGAAGACCCTTAGCCCGTGGACCTTCATCAACCCGGTACGCTATTGGAAAGT
GAATATGGCCGCGTCGAAAGCGGTAAAGCTCGGCACCGACACCTCAATCTTGACGGCCTTCAAGACGGCCCGAGGGCTTA
TGAAGGTCTCCGGAAACGACGGAATCAAGATGACCGTCCCCGTCTCGACCGCCTCGGCCTACACCTCAGCCGGATCGTCG
GTGTTGTGGAACGACAACAAGGCCGCCCAATTGTGGGACGACCTGCGCAGCGGCGACACCTCAAAGGTAACCGAACTATC
CTGA

Upstream 100 bases:

>100_bases
CTATTGTGCCAGGTCTGAATAGCCTTTTAATCCTTCGGCACACAGGACTCGCCCGATCAAGCCCGCGGATCTGAATGGAC
TTGCGACTACGGTGGAGTTC

Downstream 100 bases:

>100_bases
TTCCCACCTCTGCGTAACCCTCCGGTTGGACAGCTCACAGCAGCCTCGCCGCGCCCCAAGGCGATCGGATCGTCGTCATA
CGCCACGTGAGGCCACCCTG

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSYRGTGRRPRDEQSRQSDLDWLYGVDENDATRIDPVNPPRGTSDRTGRPRTDRRPQPRQGARRSSSQQSPQPRPSRRPP
AELYGSDGQRRPPRQARQRRQAASHPAPRARRRRHPFKVVIVLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGT
LVLLVGTDERQNLTPRQQKQLGTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQ
TIEKATNLRISGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQALGYVRMRKADAEGDLGRVKR
QQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTDTSILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSS
VLWNDNKAAQLWDDLRSGDTSKVTELS

Sequences:

>Translated_427_residues
MSYRGTGRRPRDEQSRQSDLDWLYGVDENDATRIDPVNPPRGTSDRTGRPRTDRRPQPRQGARRSSSQQSPQPRPSRRPP
AELYGSDGQRRPPRQARQRRQAASHPAPRARRRRHPFKVVIVLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGT
LVLLVGTDERQNLTPRQQKQLGTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQ
TIEKATNLRISGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQALGYVRMRKADAEGDLGRVKR
QQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTDTSILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSS
VLWNDNKAAQLWDDLRSGDTSKVTELS
>Mature_426_residues
SYRGTGRRPRDEQSRQSDLDWLYGVDENDATRIDPVNPPRGTSDRTGRPRTDRRPQPRQGARRSSSQQSPQPRPSRRPPA
ELYGSDGQRRPPRQARQRRQAASHPAPRARRRRHPFKVVIVLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGTL
VLLVGTDERQNLTPRQQKQLGTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQT
IEKATNLRISGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQALGYVRMRKADAEGDLGRVKRQ
QQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTDTSILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSSV
LWNDNKAAQLWDDLRSGDTSKVTELS

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 46945; Mature: 46814

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRGTGRRPRDEQSRQSDLDWLYGVDENDATRIDPVNPPRGTSDRTGRPRTDRRPQPRQ
CCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
GARRSSSQQSPQPRPSRRPPAELYGSDGQRRPPRQARQRRQAASHPAPRARRRRHPFKVV
HHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHH
IVLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGTLVLLVGTDERQNLTPRQQKQ
HHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
LGTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQ
CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHHHHH
TIEKATNLRISGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQA
HHHHHHCEEEEEEEEECCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LGYVRMRKADAEGDLGRVKRQQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTD
HHHHHHECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEHHHHHEEECCCC
TSILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSSVLWNDNKAAQLWDDLRSGDT
HHHHHHHHHHCCEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCC
SKVTELS
CCCCCCC
>Mature Secondary Structure 
SYRGTGRRPRDEQSRQSDLDWLYGVDENDATRIDPVNPPRGTSDRTGRPRTDRRPQPRQ
CCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
GARRSSSQQSPQPRPSRRPPAELYGSDGQRRPPRQARQRRQAASHPAPRARRRRHPFKVV
HHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHH
IVLLLAWVVWLVAVPSYALGHTGTVDATPDGPRGADHPGTLVLLVGTDERQNLTPRQQKQ
HHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
LGTGTEAGLRTDTMLLLYMPPEGKDVLISLPRDTFLRIPGHHHNKLNAAYSMGGAKLLVQ
CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHHHHH
TIEKATNLRISGYVEIGFGGFVQMVDAVGGVHVTLNKPMVDKDSHTNLPAGPQNLDGVQA
HHHHHHCEEEEEEEEECCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LGYVRMRKADAEGDLGRVKRQQQVAAQVAKKTLSPWTFINPVRYWKVNMAASKAVKLGTD
HHHHHHECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEHHHHHEEECCCC
TSILTAFKTARGLMKVSGNDGIKMTVPVSTASAYTSAGSSVLWNDNKAAQLWDDLRSGDT
HHHHHHHHHHCCEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCC
SKVTELS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]