| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843159
Identifier: 50843159
GI number: 50843159
Start: 1849665
End: 1850396
Strand: Direct
Name: 50843159
Synonym: PPA1697
Alternate gene names: NA
Gene position: 1849665-1850396 (Clockwise)
Preceding gene: 50843153
Following gene: 50843161
Centisome position: 72.25
GC content: 61.07
Gene sequence:
>732_bases ATGGGTGCCATGGTTTCCCTTACTCGGCCAACTCCAACCCGAAGCTCTGACCCCCTGACTGCCCTATGCCAGCGCAGTCA GAACGCAGGAGCATTGCCCCTACTGACGTGGTACCACGGCGCCGACCGCGGTGAGCTGTCAGCACGCACCTTGTTGACGT GGGTTACGAAGTCGGTTTACCTGCTCGATAGCGAGGGAGTCGAGCCCGGTGGTGTCTCCCGTCTTTCAGTATGCGGTGTG CGTCCCGGCCATTGGACAAGTTGCGTGTGGTTGCTGGCCTCGTGGTGGGCTGGACTACGAGTCGATCTGACTGGGCAAGA GGAAGCAGCACTAGAAGTCATTGGCCCGGACGTCGCCCCCGTCAACTCCCCCGATGTCCTCATCCAGTGCAGTCTTGCGC CCCTTGCTACTGCGTGCGAGACCCTGGTACCAGGGGCCATTGATAATGCCGATGTTCTTGCCGCCCCTGACGACCTTGTT GCAGCACGGCCTGCCGCCACCAATGCTGTGTGGCTCACAGGGCGCCAGGAATGGACCGGAGAACAACTTTTCAGCCTAGT GCCGCTAAGCCAACCAGTTTTGCTCTCTCCCGATCGGATTCGTCTCGGTGGCAGCGAACTCGTAGCCACCACCCTTACTA GTTGCCTCCTGGGTGGCGGGTCGTTAGTCCTCGTCGAGTCCACCGATGACCTGGCCACCATCGCAGCCCAGGAGGGTGCC GTCGACGTATGA
Upstream 100 bases:
>100_bases GGATCCTCCGGCCAGGATGAGGATGTGCTGCATGTCTACAGAGTATCCGGCCGCGACAACGCAACCGCGTTAGACGCACC ACAGCGTCTTATCCTTCACA
Downstream 100 bases:
>100_bases GATCAGTCGTTTGCGCGATCACCTAAACCGACGAGAAATCCAGCTCCCCAGCTCATGTGCATAATCGCCAAGACGAGAGG CAGACGGGCTCGAACCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVYLLDSEGVEPGGVSRLSVCGV RPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAPVNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLV AARPAATNAVWLTGRQEWTGEQLFSLVPLSQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA VDV
Sequences:
>Translated_243_residues MGAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVYLLDSEGVEPGGVSRLSVCGV RPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAPVNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLV AARPAATNAVWLTGRQEWTGEQLFSLVPLSQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA VDV >Mature_242_residues GAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVYLLDSEGVEPGGVSRLSVCGVR PGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAPVNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLVA ARPAATNAVWLTGRQEWTGEQLFSLVPLSQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGAV DV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25419; Mature: 25288
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVY CCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEE LLDSEGVEPGGVSRLSVCGVRPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAP EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCC VNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLVAARPAATNAVWLTGRQEWTG CCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCCEEEEECCCCCCH EQLFSLVPLSQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA HHHHHHCCCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCC VDV CCC >Mature Secondary Structure GAMVSLTRPTPTRSSDPLTALCQRSQNAGALPLLTWYHGADRGELSARTLLTWVTKSVY CCEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEE LLDSEGVEPGGVSRLSVCGVRPGHWTSCVWLLASWWAGLRVDLTGQEEAALEVIGPDVAP EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCC VNSPDVLIQCSLAPLATACETLVPGAIDNADVLAAPDDLVAARPAATNAVWLTGRQEWTG CCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCCEEEEECCCCCCH EQLFSLVPLSQPVLLSPDRIRLGGSELVATTLTSCLLGGGSLVLVESTDDLATIAAQEGA HHHHHHCCCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCC VDV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA