| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843114
Identifier: 50843114
GI number: 50843114
Start: 1794265
End: 1796091
Strand: Direct
Name: 50843114
Synonym: PPA2356
Alternate gene names: NA
Gene position: 1794265-1796091 (Clockwise)
Preceding gene: 50843113
Following gene: 50843119
Centisome position: 70.08
GC content: 56.49
Gene sequence:
>1827_bases ATGACTGACGATGGATCCAGCAAAGAGAAGTACCCAGACGATTCACACTCTGGCTACAATGACGCCGAATTGACCCCCGA GCAGCCCGATTCGAATAGTGGTCAGGCGCGAGATGACGAGCCAGCCCAGGAACTCTCGCAGGATCGCGAGGCTACGCAGC AATTCTCGACGAATCCTGACGATTACGACAATCAGCAGTATCCGCAGCAAAGCGATTATCAGAACGCCCAGTACCCACAA GACTGGAACCAATACCCCCAGAGCGGCGATGGTTGGGGAAGCGAGAGTACTGCCCCCGGATGGAGCCAGCCAGCAGGCCA GTATGAAGGCTGGAATGGCCAGTATCCCCAGCAAGGCTGGGACGGACAAAACCCCCAGCAGGGGTGGGACCCCACCCAGT ATCCACAACAAGGGTGGCAAACCGGCCAGAACCCGCAAGGATGGGATAGCCACCAGGGCTGGGACCCCAACCTTCAGGGC TGGGACGGCCAGCCCGGAGCACAGATCGATGACGTCCAAAGCACTCCCGCGGCTGCTATCGGCCAGGGTGACGTCGATAA TCTCCAAAACGACCCAAACTATTACTTCGACAGCAATGGTGAACGTGGGCCTGGCTGGTACGGCCCATCTGGAGCGTTCT TCCCTGCCACGCAGGCATATGAGCCTAACGCACAGCCAGATCTCAGCTACATGGCTGAGGGAACACCCGCAGGTACAACC GGCACCGACCATGAGCACATCAGCGAACCGGTCGGCGGGATCCCATTCAGCGATGCTCCCCAACCTACACGCAAAAGTCA ATACTGGATTATTGCCGCTGCAGCAATTCTCGTCGTTGCCATCGGTGCCGGAATATTCTTTTATCTGAGGTCCAAGTCGG GTGCGACGAAAGCTGTTCCTGCAACAGCATCGAAGCCGGCCGCCTCGGCCTCAAAGTCCCCTACCCCTGAGGTCACGGTC ACCTCGACATCGACGGCCACTGCCGGCGCTACAAGTGTCGCTCCTGCTTCCGCCACACCGATGCCGAGCGTTCCCAACGA TGCCTCGACTACCCCGTCTCCTGACCTCGTCCGTCAGCTATTTAATGCCCCGGACGCGCAAGTGCAGTGGGTCAGCCTGG CTGCCGATGGACAAAACGCTGCTGTTGCCTATGCGTCTACATTTAATATTAACGGTAAATCCGCCGGTCCCAATGGCGGA CACCTGGTAATGAGGAAAAATGGAAGTCATTGGGAGCCTCTCTCCCAGGGCGGTGTCATTGTCGATGATAATGACTGCGA TGCAATGCTCAAGACCCTGGGAGATAAGGCAGCTGTTGCAGCCAGCCAGGTCATGAACAATAAACAGTGCGATGCCGCCA TCGTGTACGACTTGGCTAAGGCGAGCCCCATCCGTCTTGGCGAAATGGCAGGTGTTGGACCTCTTAACTTAGACAAGAGC ACCTCCGAACTTGCCAGTACAATCCACGTTATTCCGGACGGCGTCGGTGACGGTTGCACGCGAAACCCAACGGCATATAG CCGATACGGCGATCTCCTCGGTGGTGTCTGGACCCAGGGCGGTAAGGCACAAGCATACCTCTTTACCGGGGGCAACAACG CCACCTCAAATGGAGCACGCATTGGAATTACAGAGGCACAACTGCGGTCTGACTATTCTAAACTCAAACTGACCGACGTC AGCACGGAGTTCTCAGGAATCAAGCTGGGCTTTCAGAAGGCCCTCGCATATTCGTATCACGGCAAAGAAATCGATTACCT CTTTAACGGTGGCAAGGTTGTCGCCTACATGATTAGGAATTCTGACTTCAGCCCAACAACGTGTTGA
Upstream 100 bases:
>100_bases CGACGTCCGCGTCCGGTAAGAAGCGTCTTGTTGACGCTGCTAGCCATGTCATCAATGTCAAATTGGCGCATTCATTGACG AAGTGAGGGGAGAACGAATC
Downstream 100 bases:
>100_bases TAACCAGATTCAAGCAATGACGTGGCTTCCTGTTGAGAGGAAGCCACGTCATTGCTTATGAGATCCTATGAACTCTGCAG GCATCACAACATACATGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MTDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPDDYDNQQYPQQSDYQNAQYPQ DWNQYPQSGDGWGSESTAPGWSQPAGQYEGWNGQYPQQGWDGQNPQQGWDPTQYPQQGWQTGQNPQGWDSHQGWDPNLQG WDGQPGAQIDDVQSTPAAAIGQGDVDNLQNDPNYYFDSNGERGPGWYGPSGAFFPATQAYEPNAQPDLSYMAEGTPAGTT GTDHEHISEPVGGIPFSDAPQPTRKSQYWIIAAAAILVVAIGAGIFFYLRSKSGATKAVPATASKPAASASKSPTPEVTV TSTSTATAGATSVAPASATPMPSVPNDASTTPSPDLVRQLFNAPDAQVQWVSLAADGQNAAVAYASTFNINGKSAGPNGG HLVMRKNGSHWEPLSQGGVIVDDNDCDAMLKTLGDKAAVAASQVMNNKQCDAAIVYDLAKASPIRLGEMAGVGPLNLDKS TSELASTIHVIPDGVGDGCTRNPTAYSRYGDLLGGVWTQGGKAQAYLFTGGNNATSNGARIGITEAQLRSDYSKLKLTDV STEFSGIKLGFQKALAYSYHGKEIDYLFNGGKVVAYMIRNSDFSPTTC
Sequences:
>Translated_608_residues MTDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPDDYDNQQYPQQSDYQNAQYPQ DWNQYPQSGDGWGSESTAPGWSQPAGQYEGWNGQYPQQGWDGQNPQQGWDPTQYPQQGWQTGQNPQGWDSHQGWDPNLQG WDGQPGAQIDDVQSTPAAAIGQGDVDNLQNDPNYYFDSNGERGPGWYGPSGAFFPATQAYEPNAQPDLSYMAEGTPAGTT GTDHEHISEPVGGIPFSDAPQPTRKSQYWIIAAAAILVVAIGAGIFFYLRSKSGATKAVPATASKPAASASKSPTPEVTV TSTSTATAGATSVAPASATPMPSVPNDASTTPSPDLVRQLFNAPDAQVQWVSLAADGQNAAVAYASTFNINGKSAGPNGG HLVMRKNGSHWEPLSQGGVIVDDNDCDAMLKTLGDKAAVAASQVMNNKQCDAAIVYDLAKASPIRLGEMAGVGPLNLDKS TSELASTIHVIPDGVGDGCTRNPTAYSRYGDLLGGVWTQGGKAQAYLFTGGNNATSNGARIGITEAQLRSDYSKLKLTDV STEFSGIKLGFQKALAYSYHGKEIDYLFNGGKVVAYMIRNSDFSPTTC >Mature_607_residues TDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPDDYDNQQYPQQSDYQNAQYPQD WNQYPQSGDGWGSESTAPGWSQPAGQYEGWNGQYPQQGWDGQNPQQGWDPTQYPQQGWQTGQNPQGWDSHQGWDPNLQGW DGQPGAQIDDVQSTPAAAIGQGDVDNLQNDPNYYFDSNGERGPGWYGPSGAFFPATQAYEPNAQPDLSYMAEGTPAGTTG TDHEHISEPVGGIPFSDAPQPTRKSQYWIIAAAAILVVAIGAGIFFYLRSKSGATKAVPATASKPAASASKSPTPEVTVT STSTATAGATSVAPASATPMPSVPNDASTTPSPDLVRQLFNAPDAQVQWVSLAADGQNAAVAYASTFNINGKSAGPNGGH LVMRKNGSHWEPLSQGGVIVDDNDCDAMLKTLGDKAAVAASQVMNNKQCDAAIVYDLAKASPIRLGEMAGVGPLNLDKST SELASTIHVIPDGVGDGCTRNPTAYSRYGDLLGGVWTQGGKAQAYLFTGGNNATSNGARIGITEAQLRSDYSKLKLTDVS TEFSGIKLGFQKALAYSYHGKEIDYLFNGGKVVAYMIRNSDFSPTTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64654; Mature: 64523
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DYDNQQYPQQSDYQNAQYPQDWNQYPQSGDGWGSESTAPGWSQPAGQYEGWNGQYPQQGW CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGQNPQQGWDPTQYPQQGWQTGQNPQGWDSHQGWDPNLQGWDGQPGAQIDDVQSTPAAAI CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC GQGDVDNLQNDPNYYFDSNGERGPGWYGPSGAFFPATQAYEPNAQPDLSYMAEGTPAGTT CCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC GTDHEHISEPVGGIPFSDAPQPTRKSQYWIIAAAAILVVAIGAGIFFYLRSKSGATKAVP CCCHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC ATASKPAASASKSPTPEVTVTSTSTATAGATSVAPASATPMPSVPNDASTTPSPDLVRQL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FNAPDAQVQWVSLAADGQNAAVAYASTFNINGKSAGPNGGHLVMRKNGSHWEPLSQGGVI HCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEE VDDNDCDAMLKTLGDKAAVAASQVMNNKQCDAAIVYDLAKASPIRLGEMAGVGPLNLDKS EECCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHEEHHHHCCCCCEEHHHCCCCCCCCCCC TSELASTIHVIPDGVGDGCTRNPTAYSRYGDLLGGVWTQGGKAQAYLFTGGNNATSNGAR HHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE IGITEAQLRSDYSKLKLTDVSTEFSGIKLGFQKALAYSYHGKEIDYLFNGGKVVAYMIRN EEEEHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEC SDFSPTTC CCCCCCCC >Mature Secondary Structure TDDGSSKEKYPDDSHSGYNDAELTPEQPDSNSGQARDDEPAQELSQDREATQQFSTNPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DYDNQQYPQQSDYQNAQYPQDWNQYPQSGDGWGSESTAPGWSQPAGQYEGWNGQYPQQGW CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGQNPQQGWDPTQYPQQGWQTGQNPQGWDSHQGWDPNLQGWDGQPGAQIDDVQSTPAAAI CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC GQGDVDNLQNDPNYYFDSNGERGPGWYGPSGAFFPATQAYEPNAQPDLSYMAEGTPAGTT CCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC GTDHEHISEPVGGIPFSDAPQPTRKSQYWIIAAAAILVVAIGAGIFFYLRSKSGATKAVP CCCHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC ATASKPAASASKSPTPEVTVTSTSTATAGATSVAPASATPMPSVPNDASTTPSPDLVRQL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FNAPDAQVQWVSLAADGQNAAVAYASTFNINGKSAGPNGGHLVMRKNGSHWEPLSQGGVI HCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEE VDDNDCDAMLKTLGDKAAVAASQVMNNKQCDAAIVYDLAKASPIRLGEMAGVGPLNLDKS EECCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHEEHHHHCCCCCEEHHHCCCCCCCCCCC TSELASTIHVIPDGVGDGCTRNPTAYSRYGDLLGGVWTQGGKAQAYLFTGGNNATSNGAR HHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE IGITEAQLRSDYSKLKLTDVSTEFSGIKLGFQKALAYSYHGKEIDYLFNGGKVVAYMIRN EEEEHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEC SDFSPTTC CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA