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The map label for this gene is sufB [H]

Identifier: 50843025

GI number: 50843025

Start: 1667019

End: 1668467

Strand: Reverse

Name: sufB [H]

Synonym: PPA1549

Alternate gene names: 50843025

Gene position: 1668467-1667019 (Counterclockwise)

Preceding gene: 50843026

Following gene: 50843024

Centisome position: 65.17

GC content: 59.28

Gene sequence:

>1449_bases
ATGACCCAGGTTGACACTCCCGCAAGCCTCCCGGGCGCCGGCGCCAGTCAAGACGAACACCTGGCTGCCCTGAGTGGCTA
CAAATATGGCTGGCACGACTCTGACGCTTACGCCGCGGCTTCCCGGCGCGGACTGTCCGAGGATGTCGTGCGTGGCATAT
CGGCTATGAAACATGAGCCACAGTGGATGCTCGATATGCGTCTCAAGGCTCTCAAGCTTTTCCAGCGCAAGCCGATGCCG
ACCTGGGGTGTCGACATCAGCACGATTGACTTTGACCAGATCAAGTACTTCGTGCGTGCTCAGGAGCGTCAGGCAGCGTC
CTGGGAGGACCTTCCCGCCGATATTAAGAACACCTACGACCGTCTGGGTATCCCGGAGGCTGAGAAGGATCGTCTGGTTG
CCGGCGTTGCCGCCCAGTACGAGTCTGAGGTGGTGTACCACAAGATTAACGAGGAGCTCGGCAAGCAGGGTGTCGTCTTC
CTCGACACTGACACTGCGCTCAAGGAGGAGCCTGAGCTCTTCCGCGAGCATTTTGCCAGCGCTGTCCCGCTCGGTGACAA
CAAGTTCTCCGCCCTCAACTCTGCGGTGTGGTCGGGTGGCACCTTCATCTACGTGCCGAAGGGTGTCCACTGCACCATCC
CGCTGCAGGCCTACTTCCGTATGAATACCGAGAATCTCGGACAGTTCGAGCGGACCCTGATTATCGTCGACGAGGGCGCG
TACGTTCACTACGTCGAGGGCTGCACTGCCCCGATCTACAAGTCGGATTCCCTGCACGCCGCGGTCGTCGAGATCATCGT
TAAAAAGAACGCTCGTTGCCGTTATACGACCATCCAGAACTGGTCGAACAACGTGTACAACCTCGTCACCCAGCGCGCTT
ACGTCGAAGAGGGCGGCACGATGGAGTGGATCGACGGCAATATCGGTTCCAAAGCCAATATGAAATATCCGGCCTGCTAC
CTCATGGGCCCCCACGCCAAGGGTGAGGCGCTGTCGGTCGCTTTTGCTGCTGAAGGTCAGCACCAAGACACCGGCGCCAA
AATGGTCCATAAGGCCCCCTACACCTCGTCGACGATCGTCTCCAAGTCGATCTCCCAAGGTGGGGGACGCTCCGCATACC
GCGGCCTGGTCTCCGTCGGTAAGGACGCCCATCACTCGTCTTCAGCTGTGCGCTGTGACGCTCTGCTCGTTGACGACATC
TCGCGATCGGACACCTACCCCTACAACGACATCCGTACTGACGAGGTGTCGATGGCCCACGAGGCTACTGTCTCCAAGGT
GAGCGAGGACCAGCTGTTCTACCTCATGCAGCGTGGTCTGACTGAGGAAGAAGCGATGGCCATGATCGTGCGCGGATTTA
TCGAGCCTATCGCCAAGGAGTTGCCGATGGAGTACGCCCTGGAGCTCAACCGACTCATCGAACTGCAGATGGAGGGTGCG
GTCGGCTGA

Upstream 100 bases:

>100_bases
GTGACGGGGTATGCACCACCCACGTTCCCGTCGATGTTGAGATTACTCGTCGGGCACTAGCCGAGCCGTCCAAGAGTCTA
TCCATCCGAAAGGACCATTC

Downstream 100 bases:

>100_bases
TCCGACCCCGGCCCCAACGAACCCCACTTTTTCGAGAAAGAGAGACACCGCGTTGAGCGCACCAGTTGCCGCGCCCGGCA
AGGGCCACAACGTCACTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MTQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMP
TWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVF
LDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA
YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGTMEWIDGNIGSKANMKYPACY
LMGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDI
SRSDTYPYNDIRTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA
VG

Sequences:

>Translated_482_residues
MTQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMP
TWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVF
LDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA
YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGTMEWIDGNIGSKANMKYPACY
LMGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDI
SRSDTYPYNDIRTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA
VG
>Mature_481_residues
TQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPT
WGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFL
DTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAY
VHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGTMEWIDGNIGSKANMKYPACYL
MGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDIS
RSDTYPYNDIRTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAV
G

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=462, Percent_Identity=40.4761904761905, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1787971, Length=130, Percent_Identity=28.4615384615385, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53480; Mature: 53349

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEP
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
QWMLDMRLKALKLFQRKPMPTWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYD
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFAS
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH
AVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA
CCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEHHEEEEECCHHCCCEEEEEEEEECCC
YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGT
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
MEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIV
EEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCHHHH
SKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAH
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
EATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCC
VG
CC
>Mature Secondary Structure 
TQVDTPASLPGAGASQDEHLAALSGYKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEP
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
QWMLDMRLKALKLFQRKPMPTWGVDISTIDFDQIKYFVRAQERQAASWEDLPADIKNTYD
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFAS
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH
AVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGA
CCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEHHEEEEECCHHCCCEEEEEEEEECCC
YVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQRAYVEEGGT
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
MEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIV
EEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCHHHH
SKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAH
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
EATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGA
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCC
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]