| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ylmA [H]
Identifier: 50843008
GI number: 50843008
Start: 1651541
End: 1652326
Strand: Reverse
Name: ylmA [H]
Synonym: PPA1530
Alternate gene names: 50843008
Gene position: 1652326-1651541 (Counterclockwise)
Preceding gene: 50843010
Following gene: 50843007
Centisome position: 64.54
GC content: 60.18
Gene sequence:
>786_bases ATGAGTGCAGCGGCGCAGTTGGCAGGCGTGGGAGTTCGACGCGGGGACCGTTGGATCCTCGACAATGTCAACCTCGACGT CTTGGACGATCAGCGTTGGGTGCTGGTCGGGCCTAACGGAGCGGGTAAGACGACCCTTCTGCAGGTCCTGGGAGCTCAAC TTCATCCCACTGTGGGGCTGGTGGAGATTCTCGACGAGATACTCGGTGCGGTTGATGTATTCGAACTGCGACCGCGGATC GGAATGGCCTGTTCGGTCTTAGCTCACCGCATTCCGGAATCGGAAAAGGTCGGCAATATGGTGGTTTCGGCGGCCTGGGC TGTCGTGGGCCGTTGGCGCGAAGCCTACGATGAGCAGGATCTGGCCCGTGCCGACGCTCTGCTGGAGCGGATGGGACTCG GCGGAATGGGCGATCGTATGTGGGGCACCCTGAGCGAGGGGGAGCGCAAACGGGTCGAAATCGCCCGTGCTCTCATGACC GATCCGGAACTGTTGCTGTTGGACGAACCGGCTGCTGGTCTTGACCTAGCTGGTCGCGAGCAGCTTATTGAAGTGCTGTC GGCTATTTTTACTGATCCCGATGCTCCGGCATCGGTTCTTGTCACTCACCATCTAGAGGAGATTCCGGCTGGAATCACCC ATGCGTTAGTGATGGCGGAGGGTCGCATCGTGGCTGCCGGTCCAGTGGAGACGACGTTGACCTCGGAAGTCCTCTCTGGT GCTTTCGGTATGCCTTTGATGGTCAGTCACATTGACGGGCGCTGGAACGCTCGTGCTGCCCGCTGA
Upstream 100 bases:
>100_bases ACGCCTTTTTCTCGTGCCAGGGTAAGCGTTCTTGGCACTGCCTAGTCGTCTTCTGCACGACAGCCCGGGTATGTCGTCGC CACAAGGTAAGTTCTTACCC
Downstream 100 bases:
>100_bases CACCGCACCGACGACGGGAGTGTGCCGTGTTGGAATCTTTCGGGGAACATCGCTGGTTGCTGTGGGCGGTGGCGTCCGCT GTGCTGGCGTGCACGGAGAT
Product: ABC transporter ATP-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGLVEILDEILGAVDVFELRPRI GMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQDLARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMT DPELLLLDEPAAGLDLAGREQLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG AFGMPLMVSHIDGRWNARAAR
Sequences:
>Translated_261_residues MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGLVEILDEILGAVDVFELRPRI GMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQDLARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMT DPELLLLDEPAAGLDLAGREQLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG AFGMPLMVSHIDGRWNARAAR >Mature_260_residues SAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGLVEILDEILGAVDVFELRPRIG MACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQDLARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTD PELLLLDEPAAGLDLAGREQLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSGA FGMPLMVSHIDGRWNARAAR
Specific function: Part Of The Binding-Protein-Dependent Transport System For Arginine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=25.7009345794392, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=25.7009345794392, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI6005701, Length=230, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI105990541, Length=251, Percent_Identity=25.4980079681275, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI157502203, Length=226, Percent_Identity=27.4336283185841, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI157502201, Length=226, Percent_Identity=27.4336283185841, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=25.9615384615385, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI31657092, Length=215, Percent_Identity=26.5116279069767, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=26.9911504424779, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI150417984, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=26.2910798122066, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787089, Length=243, Percent_Identity=32.0987654320988, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=29.9145299145299, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=27.8481012658228, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=30.316742081448, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=32.0574162679426, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786319, Length=188, Percent_Identity=31.3829787234043, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=29.8642533936652, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=26.6949152542373, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790525, Length=258, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787105, Length=217, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=30.3317535545024, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=29.7777777777778, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789593, Length=223, Percent_Identity=31.8385650224215, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1790162, Length=270, Percent_Identity=27.037037037037, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1786698, Length=208, Percent_Identity=28.3653846153846, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=27.5229357798165, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786872, Length=201, Percent_Identity=30.3482587064677, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=27.2321428571429, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1789672, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790467, Length=183, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787041, Length=250, Percent_Identity=27.2, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786398, Length=232, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786563, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=26.457399103139, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=26.2672811059908, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788897, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87081791, Length=215, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787112, Length=215, Percent_Identity=31.6279069767442, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI48994997, Length=223, Percent_Identity=26.9058295964126, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787548, Length=240, Percent_Identity=25, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787547, Length=232, Percent_Identity=24.1379310344828, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786345, Length=249, Percent_Identity=27.3092369477912, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI87082267, Length=248, Percent_Identity=29.8387096774194, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI212646699, Length=236, Percent_Identity=26.6949152542373, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=27.1186440677966, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=27.1186440677966, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193202349, Length=228, Percent_Identity=28.5087719298246, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=27.1186440677966, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115533608, Length=197, Percent_Identity=29.4416243654822, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17565586, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17558664, Length=236, Percent_Identity=27.9661016949153, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992290, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71983516, Length=237, Percent_Identity=27.8481012658228, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983510, Length=237, Percent_Identity=27.8481012658228, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983523, Length=237, Percent_Identity=27.8481012658228, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71984940, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=175, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320266, Length=245, Percent_Identity=26.1224489795918, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582014, Length=210, Percent_Identity=30, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24582012, Length=210, Percent_Identity=30, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28574150, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007328, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85726357, Length=223, Percent_Identity=27.3542600896861, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI281362751, Length=263, Percent_Identity=27.7566539923954, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24650855, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650853, Length=216, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24666092, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28028; Mature: 27896
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGL CCCHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHH VEILDEILGAVDVFELRPRIGMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH LARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTDPELLLLDEPAAGLDLAGRE HHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH QLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHC AFGMPLMVSHIDGRWNARAAR CCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure SAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGL CCHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHH VEILDEILGAVDVFELRPRIGMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH LARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTDPELLLLDEPAAGLDLAGRE HHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH QLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHC AFGMPLMVSHIDGRWNARAAR CCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]