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The map label for this gene is rimP

Identifier: 50842973

GI number: 50842973

Start: 1614201

End: 1614737

Strand: Reverse

Name: rimP

Synonym: PPA1495

Alternate gene names: 50842973

Gene position: 1614737-1614201 (Counterclockwise)

Preceding gene: 50842975

Following gene: 50842972

Centisome position: 63.07

GC content: 63.13

Gene sequence:

>537_bases
ATGAATGCAGAGAGGCTCACACGCCTACTGGAACCGGTCGTGTCCCAGGTCGGGCTCGAACTTGATCGCGTCGACGTTGT
GCCTGCCGGACGTCGTCGCCTCGTGCGCGTGACGATCGACGGTGACGGCCCCGACGGTCACGGACCTAGCCTTGACGAGA
TCTCTGAGGCCACCGCCGAGATCTCGCATTGCCTTGACGATTCCGGCGCTATGGGGGAGTCCCCGTATACCCTCGAGGTC
TCCTCGCGCGGTGTCTCTACCCCCCTCACCCAGCCGCGCCATTATCGACGCAACATCGGGCACCTGGTGCGGTTCACCCT
CAATCCGGCCGAGGAGCAGAAGTCTGGAGAGACCTTTGACGGTCGTATCGCTGAGGCTGGCGAGGAGGTCGTGACCCTCG
AGGTCGAGGCCGAGAATTCCAAACCGCATAAGCCCGTGTACACCACTCGTGAGGTCCAGCTTGCTGACGTGGCGAAGGCC
GTCGTCCAGGTGGAGCTCAATCGTCGCGACGCGCAGGCGTCAAAGGAGGAGAACTGA

Upstream 100 bases:

>100_bases
TTATCGCTATAGCCGTCGGTGAGGCGGCCGAGTCCGGCTGGTTGTGGGAGTGGCTAAACTCAGTGCGGACAATTTACAAC
GACAACAGGATGAGACACAG

Downstream 100 bases:

>100_bases
GATGGACATCGACCTGTCAACTCTGCGCATGATCGAGCGGGACAAGGACATCCCGCTTGACTATCTGCTGACGACCCTAG
AGGACGCCCTCCTCAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCLDDSGAMGESPYTLEV
SSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA
VVQVELNRRDAQASKEEN

Sequences:

>Translated_178_residues
MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCLDDSGAMGESPYTLEV
SSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA
VVQVELNRRDAQASKEEN
>Mature_178_residues
MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCLDDSGAMGESPYTLEV
SSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA
VVQVELNRRDAQASKEEN

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PROAC (Q6A7M3)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_056200.1
- ProteinModelPortal:   Q6A7M3
- SMR:   Q6A7M3
- GeneID:   2931380
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1495
- NMPDR:   fig|267747.1.peg.1477
- HOGENOM:   HBG668072
- OMA:   VEIEFSH
- ProtClustDB:   PRK00092
- BioCyc:   PACN267747:PPA1495-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19535; Mature: 19535

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAE
CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
ISHCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFD
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHEEEEECCCHHHHHCCCCCC
GRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNRRDAQASKEEN
CHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAE
CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
ISHCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFD
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHEEEEECCCHHHHHCCCCCC
GRIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNRRDAQASKEEN
CHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA