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The map label for this gene is opuAC [H]

Identifier: 50842953

GI number: 50842953

Start: 1593825

End: 1594844

Strand: Reverse

Name: opuAC [H]

Synonym: PPA1475

Alternate gene names: 50842953

Gene position: 1594844-1593825 (Counterclockwise)

Preceding gene: 50842954

Following gene: 50842952

Centisome position: 62.29

GC content: 55.69

Gene sequence:

>1020_bases
ATGAGCAGAAGCATGGTTCAACGCAAGGTCATCGCCGTGGCATCCGCCCTGACGGTCGGGGCCCTGGCTCTATCTGGGTG
TGGTGCCACTAACAGTGGAAACGGGGAATCCGGTGGCTCCGACGTCGGTTCTGACAACGTCAACACGAAGTGGGCCGATT
GCACCCCTGGTCATGGGTCGAAGGACACCACTTCCATGAAGGCCGACGGCAAGAAGGACATCACCATTGGTGCCTTCAAC
GGTTGGGATGAGTCCTTCGCGACTGCCGGGATTATGAAGAACGTCCTGGAGAAGGACGGATACAAGGTGACGATCAAGGG
CTTCGACGCTGGCCCAGGCTATGCCGGACTTGTCGCCGGGGATATCGACCTCCTTACTGACGGCTGGCTGCCGGTGACTC
ATGCCGATTACGTAAAGCGGTATGGCGACAAGATGGAGAACCTTGGCTGTTGGTACGACAACGCCAAATTGACTATTGCG
GTCAATAAGGATTCCAAGGCCCGTACTATCGGGGACCTCAAAACCATGGGCGATGAGTACGACAATACTTTGTATGGGAT
TGAGGCTGGTGCTGGTTTGACCAAGGCGACCAAGGACTCGGCCATCCCGAAATATGGGTTGAAGAATCTCAACTTCAAGA
TTTCATCAACCCCGGCCATGCTGGCCCAACTTAAGAAATCCACCAGCGCTGGTCAGGACATCGCAGTGACCCTGTGGCGC
CCGCACTGGGCCTACGGTGCCTTCCCGGTCCGCGACTTGAAGGATCCCAAGAAGGCTATGGGCAATGCTGAGGTGATCTA
CAGTTTCGGCCGTCCGGGCTTTGAGCAGGACTTTCCGAAGGTGGCCCAGTTGGTGCGCAATATGGCCTTTGACGACAACA
AACTTTCCGATCTCGAGGACACTATGTTCTCTGCGGACAAGTACGGTGGCAAGAACCAGGAAAAGGCCGTCGAAGAATGG
ATCTCACGTAACAACGACTGGGTTGACAAGCTCAAGACTGGCCAACTCGCCGAGAAGTAA

Upstream 100 bases:

>100_bases
ATACCTAGACCGCATCACCAACGGACTAGCCAATCGCACTCCGCTCGCCCGGGCGCAGCGGGCGAGCTGAGTCAATGCAC
ATGAACACGAGGAAGTACCG

Downstream 100 bases:

>100_bases
GTCAGACATCGATACGGGCCGCCCGTGTGGCAGCCCGTTGCCGACCACGGTATTCAGTCTCCTGGCTGTCGCTGCCCTTT
ACGGATTGGGTGAGGGAAGC

Product: substrate binding component of glycine/betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSRSMVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGSKDTTSMKADGKKDITIGAFN
GWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAGDIDLLTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIA
VNKDSKARTIGDLKTMGDEYDNTLYGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWR
PHWAYGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLEDTMFSADKYGGKNQEKAVEEW
ISRNNDWVDKLKTGQLAEK

Sequences:

>Translated_339_residues
MSRSMVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGSKDTTSMKADGKKDITIGAFN
GWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAGDIDLLTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIA
VNKDSKARTIGDLKTMGDEYDNTLYGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWR
PHWAYGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLEDTMFSADKYGGKNQEKAVEEW
ISRNNDWVDKLKTGQLAEK
>Mature_338_residues
SRSMVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGSKDTTSMKADGKKDITIGAFNG
WDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAGDIDLLTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIAV
NKDSKARTIGDLKTMGDEYDNTLYGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWRP
HWAYGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLEDTMFSADKYGGKNQEKAVEEWI
SRNNDWVDKLKTGQLAEK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 36574; Mature: 36443

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSMVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDTTSMKADGKKDITIGAFNGWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAG
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEC
DIDLLTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIAVNKDSKARTIGDLKTMGDEY
CHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCHHHHHHHHHHCHHH
DNTLYGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWR
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEEEC
PHWAYGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLED
CCCCCCCCCHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
TMFSADKYGGKNQEKAVEEWISRNNDWVDKLKTGQLAEK
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRSMVQRKVIAVASALTVGALALSGCGATNSGNGESGGSDVGSDNVNTKWADCTPGHGS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDTTSMKADGKKDITIGAFNGWDESFATAGIMKNVLEKDGYKVTIKGFDAGPGYAGLVAG
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEC
DIDLLTDGWLPVTHADYVKRYGDKMENLGCWYDNAKLTIAVNKDSKARTIGDLKTMGDEY
CHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCHHHHHHHHHHCHHH
DNTLYGIEAGAGLTKATKDSAIPKYGLKNLNFKISSTPAMLAQLKKSTSAGQDIAVTLWR
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEEEC
PHWAYGAFPVRDLKDPKKAMGNAEVIYSFGRPGFEQDFPKVAQLVRNMAFDDNKLSDLED
CCCCCCCCCHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
TMFSADKYGGKNQEKAVEEWISRNNDWVDKLKTGQLAEK
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]