| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842939
Identifier: 50842939
GI number: 50842939
Start: 1577984
End: 1579183
Strand: Direct
Name: 50842939
Synonym: PPA1460
Alternate gene names: NA
Gene position: 1577984-1579183 (Clockwise)
Preceding gene: 50842938
Following gene: 50842940
Centisome position: 61.63
GC content: 60.67
Gene sequence:
>1200_bases ATGAAGATTGGCGTTAATTACACCCCCTCCCAAGGGTGGTTTCACAGCTGGCTTGACCTCGATCTCGACGCCACCCGCCG TGACTTTGAAGGCATTGCCCAGCTCGGCCTCGATCATGTGCGCCTGTTTCCGCTCTGGCCGTTGTTACAGCCTAACCGCG GTCTGGTCCGCCCACGGGCCCTCGATGACGTCGTCTCCGTCGTGCGCGCGGCCGGCGAATTTGACCTTGAGGTTACCGTC GATGCCCTCAATGGACATCTGTCGAGTTACGACTTCCTGCCCTCCTGGGTGATCACATGGCACGCGTCAAATCTCTTCAC CGATCCGCTCGTCGAGGCTGGCCAGACCGACCTCATCAGCCAACTGGCAACACGCCTGCGGGAGGAGCCGAACGCCACCG GCATGACGGTGGGCAACGAGTTCCCGCAGTACACAGCTCTGGCCCCGGACCATCATCATCCGACGCGCAGTGAGTGCACC GTCGATGAGGCCCAGACGTGGTTGGAAACGATGCTCGGGACCATGCGGGACCAGTGGCCGGACGGACGGTTCTGGTTCGG GTTCGACGACGACCTCTGGTTCGTCGACGACCATCCGTTCACCCCACGTCACGCCGTAACTCAGGGATCCGCTACGACCG TCCATTCTTGGGTGTTCGCCCAAGTAGGCCCCCGTTTTGGAGAGGGACATCCCGCCCTGACATGGTTCCCCCGCTATCTG CTCGAACTGGCCCGAGCCTGGAGCCCTAACCCCCAACGCCCACTCTGGCTGCAAGAAATAGGAGCACCTCGAACCCACGT ACCCAACGCCATCGCCGCCACCTTCATGACAACAACGATGACATCACTAACCTCAACACCAGGCCTAGAAGCCATCACCT GGTGGTGCTCCCACGACGTCTCCCATGACCTACTCGATTTTCCAAAACTGGAATACTCACTCGGCCTATTCACCAACGAC GGCAAACCAAAACCAGAAGCCCTGGCCCTATCAGACATCCTGCCCGACCTGCACAACGCCCAACCCCAGAACCAACTCGA CGAACCACTCGAGTTCAGCGCCAACTGGGATACCGGTCAAGGCCGCTCAACGTGCTCCCCGATAGGCGATCTCTTCGCTC AGTGGGTTGACCAGGCAGAACGAACCGGGAAGGCTCCGCGGCTTCGCCGAGTGCGAACGCAACATTGCCCTGTGCCCTGA
Upstream 100 bases:
>100_bases AGGTAGCGCCGTCGGTCGTCACCGCTGACCTTGCCGACGGCACCATCGGTTTGTCCATGCGCCCCTTCCAAGTCGCGACC CTCAGGTTGGGACGCAACCG
Downstream 100 bases:
>100_bases GCGATGGGCGCTTATTAGCATCGTTGTATGCGTATTTTAGTTGTAGCAGCCCGTGGAACAAATGGAAAAGGTAACCACCT TGTTTCGCAATCATGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP
Sequences:
>Translated_399_residues MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP >Mature_399_residues MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45043; Mature: 45043
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA CEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHH LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLIS HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCHHCCCHHHHCCCHHHHH QLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECTVDEAQTWLETMLGTMRDQWP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL CCCEEECCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDV HHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCC SHDLLDFPKLEYSLGLFTNDGKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQ CHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCC GRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA CEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHH LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLIS HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCHHCCCHHHHCCCHHHHH QLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECTVDEAQTWLETMLGTMRDQWP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL CCCEEECCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDV HHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCC SHDLLDFPKLEYSLGLFTNDGKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQ CHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCC GRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA