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The map label for this gene is 50842921

Identifier: 50842921

GI number: 50842921

Start: 1558609

End: 1558887

Strand: Reverse

Name: 50842921

Synonym: PPA1442

Alternate gene names: NA

Gene position: 1558887-1558609 (Counterclockwise)

Preceding gene: 50842922

Following gene: 50842920

Centisome position: 60.89

GC content: 62.01

Gene sequence:

>279_bases
GTGCTAGCCGACGCCCTGGAACACCTCGTCTCTGGCATCGTCGCCAATCCTGACGACGTCCGGGTCCGGGAGAAGGACCT
GCGACGCGGCCGGATGCTTGAGGTGCGCGTCAATCCTTCCGACATTGGTAAGGTCATCGGTCGTCAGGGTCGTACGGCCT
CTTCGTTGCGCACGGTTATTGGTGCGTTGGCCGGTGACGAGCAGATCAGGATCGACTTCGTTGATGTTGATCGACGCGGG
TCGGGACGGCATTCCGACCACCGTGGCCATCGTCACTGA

Upstream 100 bases:

>100_bases
CGCGTGAGGCCATCACCAAGAAGTCCGAAGGGGCAGCTGCTGACGAGGCTTCCGAGTCGGCGGCTGGAGACAACAGTGGC
GAGAAGGCTGAGGCCTGATC

Downstream 100 bases:

>100_bases
ATCGCCAGTCCTTTGACAATATGGGCCGTGGTTCCGCTCTGGCGGGGCTGCGGCCCATGTGCTGTGTCTGGCATCTTGTC
TAATCTCATCATTCCCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVIGALAGDEQIRIDFVDVDRRG
SGRHSDHRGHRH

Sequences:

>Translated_92_residues
MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVIGALAGDEQIRIDFVDVDRRG
SGRHSDHRGHRH
>Mature_92_residues
MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVIGALAGDEQIRIDFVDVDRRG
SGRHSDHRGHRH

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 10243; Mature: 10243

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVI
CHHHHHHHHHHHHCCCCCCCEECHHHCCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHH
GALAGDEQIRIDFVDVDRRGSGRHSDHRGHRH
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLADALEHLVSGIVANPDDVRVREKDLRRGRMLEVRVNPSDIGKVIGRQGRTASSLRTVI
CHHHHHHHHHHHHCCCCCCCEECHHHCCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHH
GALAGDEQIRIDFVDVDRRGSGRHSDHRGHRH
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]