Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 50842876

GI number: 50842876

Start: 1511846

End: 1513525

Strand: Reverse

Name: recN [H]

Synonym: PPA1394

Alternate gene names: 50842876

Gene position: 1513525-1511846 (Counterclockwise)

Preceding gene: 50842877

Following gene: 50842875

Centisome position: 59.12

GC content: 62.08

Gene sequence:

>1680_bases
GTGATACGTAGTGTGCGAATTCGTGGACTCGGCGTCATCGATGAGACGGTCCTCGAACCCTCGTCCGCGCTGACGGCAGT
CACCGGCGAGACCGGCGCCGGAAAGACCATGGTGGTCACCGGTATTGGTTTGCTGCTCGGCGACAAGGCTGACACTGGAT
TGGTCCGGCATGGCTGCGATCGTGCCGTCGTCGAAGCCGTCCTCGACACGCCTGATGCCGGTCGCGTCAGCGAGCTTGGC
GGAACAGTCGAGGATGGCGAGGTTATCTGCGCTCGACACATCACGAGTCGTCGCTCTCGAGCGCTGCTTGGAGGAGCTCA
AGTTACCGCTAGTCAGCTGGCCCACATCGTTGGGGATCAGGTGACCATCCATGGCCAATCTGAACAAGTGAGGTTGGTCG
ACGCAGCGCGGCAGCTCGACGTCGTTGACCGGGCTGCCGGAGATGAGCTGGCAGGCTACCTAAGTCGACATGCACAGCTG
TGGTCGGAGTTTCGTGCTGCATCCCAGCGCCTTCAGCGCCTCAACGAGGATCGCGCTGGGGCCGAGATGGAACGCGAGGT
GCTTACGCGTCGGGTCGGCGAGGTTGACGCTGTTGATCCTAAGCCCCATGAGGACGACGACCTCATCGCCGAGATGGCGG
GGCTACAGGCTGCTCAGTCGATCCGGGAATCCTTGAACAAGGCTGATGTCCTGCTCAATGGGGTAGAGACGTCGACCGGT
CCGCAGCCGGGTGCGCTTGCTTTGCTGGAACAGGCCGTACATGAGCTGGATGGCACTGGGGATGCTGATCCTCACGCTGC
TGAGTTGGCTGAGCGCGCCCGCCAGATGTCGTATGACCTTACTGACCTCGCTGCTTCGGTCGCTGGCCATGCGGCTCGGG
CTGAAGCTGATCCGCAACGGCTTGAGGAATTGGGGGGTCGTTTGGCGGCTATTCAGCGGCTGTTGAGGGCGCGCACCACT
ACCCTCGACGATCTCCTCGACTCCACTGCGGCAGACCGACACCGACTTGCTGAGCTTGACCCTGGCGCGACAGATCTCGA
TTTCTTGGGACAGCAGGTTGAACAACTGCGATTCGAGTTGAGGCGATCCGCGGACCACATGAGCGCGGTGCGCCGTCGCA
CGGCCGTCCGGCTTGCTGCTGAGGTGCGTCCTGAGCTGGCTGCTCTTGCGATGCCGCACGCCCGGCTGGAATTTCGTGTC
GAGCCTGCACCTATGGGGCCACGCGGCGCTGACTCGGTGACGATCATGTTGGCGGCCAACCCCGGTTCCGATTTGGCCCC
GTTGGCTAAGGCCGCCTCGGGCGGAGAGCTTTCACGAGTGAGACTGGCCTTAGAGGTCGTCGTGGCCCAACCCCAGGTTC
CGCAAACTTTCGTCTTCGACGAGATCGATTCGGGCGTCGGAGGCGCGGTCGGTATCGAGATCGGACGACGACTGCGTCAG
TTGGCAAGACGGCACCAGGTCATTGTTGTCACTCACTTGGCCCAGGTGGCTGCCTTCGCGGACACGCATGTCGTTATCAC
TAAGGCTTCCGACGGGGCCATCACTAGTTCGGGGCTGCGCGAGGTCACTGGATCGGATCGGGAAATCGAACTGTCTCGGA
TGATGAGCGGCATGGTGGACTCAGAATCCGGGCTAGAACATGCTCATGACCTGCTGCGCGAGGCTGGTGAGATGGATTGA

Upstream 100 bases:

>100_bases
TGGCCGCGCAGCCCTTCACATCGCGTCTGGTCAAGAAGTTTGAGCTCCCGGTCAGCGGGTGGCGTCAGGGTCGTGACCGT
CATCACCTAGAGGAGACTTC

Downstream 100 bases:

>100_bases
TGACGGCGTTGGCGCATGGGACGACTGGACCATTTCGAAAAGAGCAACGCATTCATCATGGAGGCGACGGTGGTGACTCT
GTCGACGAGTGCTGAAATAG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCDRAVVEAVLDTPDAGRVSELG
GTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQVTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQL
WSEFRAASQRLQRLNEDRAGAEMEREVLTRRVGEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG
PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQRLEELGGRLAAIQRLLRARTT
TLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFELRRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRV
EPAPMGPRGADSVTIMLAANPGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGAVGIEIGRRLRQ
LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVDSESGLEHAHDLLREAGEMD

Sequences:

>Translated_559_residues
MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCDRAVVEAVLDTPDAGRVSELG
GTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQVTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQL
WSEFRAASQRLQRLNEDRAGAEMEREVLTRRVGEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG
PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQRLEELGGRLAAIQRLLRARTT
TLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFELRRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRV
EPAPMGPRGADSVTIMLAANPGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGAVGIEIGRRLRQ
LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVDSESGLEHAHDLLREAGEMD
>Mature_559_residues
MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCDRAVVEAVLDTPDAGRVSELG
GTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQVTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQL
WSEFRAASQRLQRLNEDRAGAEMEREVLTRRVGEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG
PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQRLEELGGRLAAIQRLLRARTT
TLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFELRRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRV
EPAPMGPRGADSVTIMLAANPGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGAVGIEIGRRLRQ
LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVDSESGLEHAHDLLREAGEMD

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=561, Percent_Identity=29.0552584670232, Blast_Score=204, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59625; Mature: 59625

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCD
CCCCEEECCCCCHHHHHHCCCHHEEEEECCCCCCCEEEEEHHHHHCCCCCCCCHHHHCCC
RAVVEAVLDTPDAGRVSELGGTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQ
HHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQLWSEFRAASQRLQRLNEDRAG
EEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEMEREVLTRRVGEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQR
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
LEELGGRLAAIQRLLRARTTTLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFEL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRVEPAPMGPRGADSVTIMLAAN
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
PGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGAVGIEIGRRLRQ
CCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVD
HHHHCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHCCC
SESGLEHAHDLLREAGEMD
CCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRSVRIRGLGVIDETVLEPSSALTAVTGETGAGKTMVVTGIGLLLGDKADTGLVRHGCD
CCCCEEECCCCCHHHHHHCCCHHEEEEECCCCCCCEEEEEHHHHHCCCCCCCCHHHHCCC
RAVVEAVLDTPDAGRVSELGGTVEDGEVICARHITSRRSRALLGGAQVTASQLAHIVGDQ
HHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VTIHGQSEQVRLVDAARQLDVVDRAAGDELAGYLSRHAQLWSEFRAASQRLQRLNEDRAG
EEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEMEREVLTRRVGEVDAVDPKPHEDDDLIAEMAGLQAAQSIRESLNKADVLLNGVETSTG
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PQPGALALLEQAVHELDGTGDADPHAAELAERARQMSYDLTDLAASVAGHAARAEADPQR
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
LEELGGRLAAIQRLLRARTTTLDDLLDSTAADRHRLAELDPGATDLDFLGQQVEQLRFEL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RRSADHMSAVRRRTAVRLAAEVRPELAALAMPHARLEFRVEPAPMGPRGADSVTIMLAAN
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
PGSDLAPLAKAASGGELSRVRLALEVVVAQPQVPQTFVFDEIDSGVGGAVGIEIGRRLRQ
CCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LARRHQVIVVTHLAQVAAFADTHVVITKASDGAITSSGLREVTGSDREIELSRMMSGMVD
HHHHCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHCCC
SESGLEHAHDLLREAGEMD
CCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]