| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842842
Identifier: 50842842
GI number: 50842842
Start: 1482878
End: 1483333
Strand: Direct
Name: 50842842
Synonym: PPA1358
Alternate gene names: NA
Gene position: 1482878-1483333 (Clockwise)
Preceding gene: 50842839
Following gene: 50842848
Centisome position: 57.92
GC content: 60.96
Gene sequence:
>456_bases GTGCGCATCTATCATGCATCCCCGGTCGCAACCCTGCTAGTGGTCTTCCTCCTGACCACTGCCTGCTCCGGCCAGGATGA GCCGATCGCCCATCCTTCTCCCAGCGGCCCTGCTGCGGCGGGGTGTCGAGCAGTCATGGCAGATTTACCGCAAACGGTTG CCGGGGCGACGCTCAACGACCACGACACGACCGTGGCAACCTGGGGTGATCCGCATATCGTGCTGCGCTGCGGGGTCGAC AAGCCTGCTGGCCTCCAACCAACGTCACCCTGTGACGTCGTCAACGATGTCGGATGGTTTTCTGAGCAGATTGACGACGG CTGGCGATTCACCACTATTGGGAGAGCAGGCAACATCGAGGTGACGGTTCCGACTAGTTACGCCCCGCAGGCGGACGCCC TGGTCGATCTTTCAGCAGCCATTAAGAAAATGCCCCAAGTACGTGCTTGCCAGTGA
Upstream 100 bases:
>100_bases CCATCGAGGAGATGAGGGGAAACTCCCCTACCTGGGAAATGGTCGTCGTGGTGGCCATGGGATCTCCTTATCAACCGGTC ATCGGCGCTAGCGTGAATAT
Downstream 100 bases:
>100_bases GATACACCCCGATCAGCGCAGGCCGAGGGGCCTTTCCAAAGCCAACTCAATGAGCTCACTGACAATCTGGGCGTACGTCA TGCCACTGGCCTGCCACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRIYHASPVATLLVVFLLTTACSGQDEPIAHPSPSGPAAAGCRAVMADLPQTVAGATLNDHDTTVATWGDPHIVLRCGVD KPAGLQPTSPCDVVNDVGWFSEQIDDGWRFTTIGRAGNIEVTVPTSYAPQADALVDLSAAIKKMPQVRACQ
Sequences:
>Translated_151_residues MRIYHASPVATLLVVFLLTTACSGQDEPIAHPSPSGPAAAGCRAVMADLPQTVAGATLNDHDTTVATWGDPHIVLRCGVD KPAGLQPTSPCDVVNDVGWFSEQIDDGWRFTTIGRAGNIEVTVPTSYAPQADALVDLSAAIKKMPQVRACQ >Mature_151_residues MRIYHASPVATLLVVFLLTTACSGQDEPIAHPSPSGPAAAGCRAVMADLPQTVAGATLNDHDTTVATWGDPHIVLRCGVD KPAGLQPTSPCDVVNDVGWFSEQIDDGWRFTTIGRAGNIEVTVPTSYAPQADALVDLSAAIKKMPQVRACQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15865; Mature: 15865
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIYHASPVATLLVVFLLTTACSGQDEPIAHPSPSGPAAAGCRAVMADLPQTVAGATLND CEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEECC HDTTVATWGDPHIVLRCGVDKPAGLQPTSPCDVVNDVGWFSEQIDDGWRFTTIGRAGNIE CCCEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEE VTVPTSYAPQADALVDLSAAIKKMPQVRACQ EEECCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRIYHASPVATLLVVFLLTTACSGQDEPIAHPSPSGPAAAGCRAVMADLPQTVAGATLND CEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEECC HDTTVATWGDPHIVLRCGVDKPAGLQPTSPCDVVNDVGWFSEQIDDGWRFTTIGRAGNIE CCCEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEE VTVPTSYAPQADALVDLSAAIKKMPQVRACQ EEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA