| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is cshA [H]
Identifier: 50842805
GI number: 50842805
Start: 1440298
End: 1441983
Strand: Direct
Name: cshA [H]
Synonym: PPA1325
Alternate gene names: 50842805
Gene position: 1440298-1441983 (Clockwise)
Preceding gene: 50842803
Following gene: 50842806
Centisome position: 56.26
GC content: 60.38
Gene sequence:
>1686_bases ATGAGAGGTAAAGTGATTGATGGTGTGTCGAACGCGTATCTTCGCTGGTCCACACCAGACGTGGCATTAAACGACGTCAC AAGAACGACACCGGGCCTTGACGGGCCCACGCACGAAGAGGCCAAGACACTGACCGAGACTACTGTTTCCGTTCCCACCT CCTTCGCCGACCTCGGCGTCCGAGAAGATATCTGCCAGGCGTTGGAAGGGGTGGGAATTGTCTCCCCGTTCCCGATCCAG GCCATGTCGATCCCGATTGCCGTCGAGGGCACGGATCTCATTGGGCAGGCGCGTACTGGCACTGGCAAAACACTCGCCTT CGGCATCACCATCTTGCTGCGCATCACCCTGCCCGGTGACGAAGGTTGGGAAGAACTCACCACCAAAGGCAAGCCCCAAG CACTCGTGATGTGCCCTACCCGGGAGCTGGCTCTCCAAGTGTCTAAAGACATCTCCACTGCCGCTTCTGTCCGCGGCGCA CGTGTCCTTACCGTCTACGGTGGGGTTGGTTATGAGTCGCAGATTGACGCACTTAAAGCGGGGGTCGATGTTGTCGTCGG TACTCCTGGACGCCTTCTTGACCTATCCCAGCGCAAGGACCTCGATCTGTCCCATGTGCGCATCGTCGTTCTTGACGAGG CCGACGAGATGCTTGATCTCGGCTTCTTGCCTGACGTCGAGAATCTCATCGGACGCACTCCGGCCTCTCGCCAGACGATG CTGTTTTCGGCCACTATGCCGGCCCCGATTATGGCCCTAGCCCGGTCCCAACTACATCGTCCGGTGCACGTCCGCGCCGA AGGAGCCGACACCCAGGCCACGGTCCCCGACACCCAGCAGTTTGTATACCAGGCCCATCCCCTCGACAAGATTGAGATCA TTGGACGCATTCTGCAGGCCAACGACGTCGAGAAGGTCATCATCTTCTGCCGCACCAAGCGTGCATGCCAGCGGCTTTCT GACGACCTCGACGACCGCGGTTTCAAAACCCGCGCCATCCACGGTGATCTCACGCAGGTCGCGCGCGAAAAAGCGCTCAA GAAATTCCGTCATGGCGATGCGACCATCCTGGTGGCGACCGATGTCGCTGCCCGTGGCATTGACGTCACCGGGGTGTCCC ACGTCATCAACCATGAATGTCCCGAAGACGAGAAAACATACGTCCACCGCATTGGTCGCACCGGCCGCGCGGGTGCCAAG GGCGTCGCCGTCACCCTCGTAGATTGGGCTGACGTCACCCGCTGGAAGCTCATCAACAAGGCCCTCAACCTCGAGCTGTC CGAGCCGGTCGAAACTTATTCCACCTCCCCCCACCTCTACACCGATCTCGACATACCCGAGGACGCTCAGGGCCAGATCA TCGACCTTGAGAAGGCCGCTTCCGAGAAGAAACGGCGACAGCATCGCCACGGCCATGATGGCTCCCACCATGAGAAGGCC ACACGGCGGCGCTCTCGTGATGCTTCCAAGGATGGAGATAAAGCGCGGCGAAAGCGCATTCGTCGCCGCAACGGCAAAGT GGTCAGGGGCTCCTCACTCAACCCCGCACCTCACCAGAAAGCAGACCAGAACCGACACGCAGCAAACAGCCACCATCACG ATATAGTCGCCGGCCCGCGCGAGGCGCGGCCGAGACACCGACGCGCCCGGAATGCCCTGCACAACCGACCATCAAACAGG CTGTAA
Upstream 100 bases:
>100_bases GGCGCAAGACGCCGAGACAGACCAAAAAATCGTCGCAACGGCGGTGTGACTGGGGTTCGTGTCGTCGACGCTCACCCCAT CAGGTTAGAAGGTTGATGGC
Downstream 100 bases:
>100_bases CGATCACGTCTGATCCACAATTCGTGCGGCCAGACGCCCACGGAGTGACCGCATCACCCCCTACACTGAACAAAATGCGC GGCGTTTCCGGTTCACCGGA
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MRGKVIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQ AMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGA RVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM LFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGRILQANDVEKVIIFCRTKRACQRLS DDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAK GVAVTLVDWADVTRWKLINKALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDLEKAASEKKRRQHRHGHDGSHHEKA TRRRSRDASKDGDKARRKRIRRRNGKVVRGSSLNPAPHQKADQNRHAANSHHHDIVAGPREARPRHRRARNALHNRPSNR L
Sequences:
>Translated_561_residues MRGKVIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQ AMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGA RVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM LFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGRILQANDVEKVIIFCRTKRACQRLS DDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAK GVAVTLVDWADVTRWKLINKALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDLEKAASEKKRRQHRHGHDGSHHEKA TRRRSRDASKDGDKARRKRIRRRNGKVVRGSSLNPAPHQKADQNRHAANSHHHDIVAGPREARPRHRRARNALHNRPSNR L >Mature_561_residues MRGKVIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQ AMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGA RVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM LFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGRILQANDVEKVIIFCRTKRACQRLS DDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAK GVAVTLVDWADVTRWKLINKALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDLEKAASEKKRRQHRHGHDGSHHEKA TRRRSRDASKDGDKARRKRIRRRNGKVVRGSSLNPAPHQKADQNRHAANSHHHDIVAGPREARPRHRRARNALHNRPSNR L
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=391, Percent_Identity=37.8516624040921, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI222352149, Length=364, Percent_Identity=39.010989010989, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI41327771, Length=415, Percent_Identity=36.6265060240964, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=37.6315789473684, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI41327773, Length=411, Percent_Identity=35.7664233576642, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=37.8151260504202, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=37.8151260504202, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=37.7717391304348, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=37.7717391304348, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=37.7717391304348, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=37.7717391304348, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=37.7717391304348, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI20149629, Length=394, Percent_Identity=35.7868020304569, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI7661920, Length=385, Percent_Identity=32.4675324675325, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=36.0313315926893, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI164664518, Length=383, Percent_Identity=33.9425587467363, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI4758138, Length=411, Percent_Identity=33.0900243309002, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=36.7977528089888, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=36.7977528089888, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=36.7977528089888, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=34.4927536231884, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=36.7977528089888, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=34.7708894878706, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=34.7708894878706, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI224593278, Length=378, Percent_Identity=36.2433862433862, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI4758112, Length=400, Percent_Identity=32.25, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI18375623, Length=400, Percent_Identity=32.25, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI4503529, Length=398, Percent_Identity=32.4120603015075, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI21040371, Length=382, Percent_Identity=32.9842931937173, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI31542656, Length=386, Percent_Identity=33.6787564766839, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=33.9887640449438, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI51094101, Length=358, Percent_Identity=32.6815642458101, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI164419743, Length=358, Percent_Identity=32.6815642458101, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=32.9608938547486, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI41327776, Length=394, Percent_Identity=32.48730964467, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI256223453, Length=390, Percent_Identity=30, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38327634, Length=353, Percent_Identity=32.2946175637394, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=30.2452316076294, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=32.1428571428571, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI8922886, Length=376, Percent_Identity=31.6489361702128, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI6005743, Length=376, Percent_Identity=31.1170212765957, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569505, Length=356, Percent_Identity=30.0561797752809, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI41327779, Length=357, Percent_Identity=33.8935574229692, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI38569503, Length=356, Percent_Identity=30.0561797752809, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=33.0357142857143, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=31.4763231197772, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI62241024, Length=336, Percent_Identity=32.1428571428571, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI9506931, Length=387, Percent_Identity=31.7829457364341, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI17505907, Length=407, Percent_Identity=28.5012285012285, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=28.6842105263158, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI154759257, Length=422, Percent_Identity=30.3317535545024, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=29.6969696969697, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=33.0316742081448, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=42.7055702917772, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=39.9470899470899, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1790214, Length=354, Percent_Identity=38.135593220339, Blast_Score=248, Evalue=6e-67, Organism=Escherichia coli, GI1787605, Length=361, Percent_Identity=38.2271468144044, Blast_Score=242, Evalue=4e-65, Organism=Escherichia coli, GI1788930, Length=363, Percent_Identity=37.7410468319559, Blast_Score=209, Evalue=3e-55, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=38.2198952879581, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71987143, Length=383, Percent_Identity=34.7258485639687, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=37.0967741935484, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=37.0967741935484, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=37.0967741935484, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71995724, Length=382, Percent_Identity=32.9842931937173, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=37.2703412073491, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17507121, Length=382, Percent_Identity=32.7225130890052, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI86570094, Length=409, Percent_Identity=34.718826405868, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=38.3522727272727, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71995718, Length=390, Percent_Identity=36.4102564102564, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17555296, Length=426, Percent_Identity=33.8028169014084, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17552114, Length=409, Percent_Identity=31.7848410757946, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=35.4922279792746, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=38.0813953488372, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=34.2696629213483, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=36.2880886426593, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=34.2696629213483, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI115532548, Length=384, Percent_Identity=33.59375, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI115532546, Length=384, Percent_Identity=33.59375, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71982858, Length=398, Percent_Identity=31.6582914572864, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=31.758530183727, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=31.3725490196078, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507877, Length=387, Percent_Identity=30.2325581395349, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17505370, Length=371, Percent_Identity=33.1536388140162, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17507879, Length=423, Percent_Identity=31.2056737588652, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=31.4814814814815, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=32.2077922077922, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=32.2077922077922, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=32.0610687022901, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17509811, Length=362, Percent_Identity=31.2154696132597, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=28.428927680798, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI32564046, Length=388, Percent_Identity=28.6082474226804, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71990816, Length=355, Percent_Identity=29.8591549295775, Blast_Score=145, Evalue=8e-35, Organism=Caenorhabditis elegans, GI25148291, Length=336, Percent_Identity=28.2738095238095, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=24.9336870026525, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17508543, Length=426, Percent_Identity=24.8826291079812, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=27.0348837209302, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=25.4117647058824, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=33.9805825242718, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71997889, Length=383, Percent_Identity=27.154046997389, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=39.0909090909091, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565430, Length=358, Percent_Identity=24.3016759776536, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32564293, Length=150, Percent_Identity=30.6666666666667, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6325138, Length=388, Percent_Identity=37.3711340206186, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=378, Percent_Identity=37.037037037037, Blast_Score=240, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=345, Percent_Identity=40.2898550724638, Blast_Score=236, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6320041, Length=375, Percent_Identity=34.4, Blast_Score=230, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=338, Percent_Identity=41.7159763313609, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321856, Length=429, Percent_Identity=35.6643356643357, Blast_Score=227, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=400, Percent_Identity=32, Blast_Score=223, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6322912, Length=396, Percent_Identity=34.0909090909091, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6322323, Length=396, Percent_Identity=34.0909090909091, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=34.5303867403315, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=32.4582338902148, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=35.8757062146893, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=33.7016574585635, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=30.1939058171745, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=33.2425068119891, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=437, Percent_Identity=29.9771167048055, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=397, Percent_Identity=29.9748110831234, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=31.1111111111111, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=28.4705882352941, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=395, Percent_Identity=27.8481012658228, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=416, Percent_Identity=28.3653846153846, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321267, Length=374, Percent_Identity=32.0855614973262, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323306, Length=333, Percent_Identity=26.7267267267267, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=384, Percent_Identity=26.3020833333333, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324366, Length=406, Percent_Identity=23.6453201970443, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6322876, Length=185, Percent_Identity=35.6756756756757, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21355075, Length=356, Percent_Identity=39.3258426966292, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=37.9581151832461, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=36.7977528089888, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=37.9213483146067, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17977678, Length=377, Percent_Identity=37.4005305039788, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=37.0165745856354, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24645031, Length=385, Percent_Identity=32.987012987013, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=38.544474393531, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI28574962, Length=385, Percent_Identity=35.5844155844156, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=34.6368715083799, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644483, Length=375, Percent_Identity=34.1333333333333, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644487, Length=375, Percent_Identity=34.1333333333333, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI45551833, Length=375, Percent_Identity=34.1333333333333, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644485, Length=375, Percent_Identity=34.1333333333333, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI281361218, Length=375, Percent_Identity=34.1333333333333, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24644481, Length=375, Percent_Identity=34.1333333333333, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583279, Length=406, Percent_Identity=33.4975369458128, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583281, Length=406, Percent_Identity=33.4975369458128, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24585582, Length=442, Percent_Identity=33.0316742081448, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24582080, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI24582078, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI17136248, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI24582075, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI18857967, Length=413, Percent_Identity=32.2033898305085, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI21356161, Length=428, Percent_Identity=33.1775700934579, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI28575014, Length=409, Percent_Identity=32.0293398533007, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI17136814, Length=456, Percent_Identity=31.140350877193, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24581954, Length=400, Percent_Identity=32.75, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581952, Length=400, Percent_Identity=32.75, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581956, Length=400, Percent_Identity=32.75, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=31.3186813186813, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI281365720, Length=338, Percent_Identity=34.3195266272189, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI28571808, Length=365, Percent_Identity=32.3287671232877, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI28571809, Length=365, Percent_Identity=32.3287671232877, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI20130173, Length=450, Percent_Identity=28.6666666666667, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI21355559, Length=361, Percent_Identity=33.2409972299169, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=30.3763440860215, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=31.4285714285714, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=32.8267477203647, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=26.9047619047619, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=26.9047619047619, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=28.428927680798, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI17136666, Length=455, Percent_Identity=29.2307692307692, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24640164, Length=383, Percent_Identity=25.5874673629243, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI19920478, Length=342, Percent_Identity=27.4853801169591, Blast_Score=109, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 61722; Mature: 61722
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGKVIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGV CCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC REDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGD HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCHHHEEEEEEEEEECCCC EGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKA CCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC GVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM CCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHCCCCCCCCEE LFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGRILQA EEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC NDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVAT CCCEEEEEEECCHHHHHHHHHCHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEE DVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAKGVAVTLVDWADVTRWKLINK CHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHH ALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDLEKAASEKKRRQHRHGHDGSHHEKA HHCCCCCCCHHHHCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHH TRRRSRDASKDGDKARRKRIRRRNGKVVRGSSLNPAPHQKADQNRHAANSHHHDIVAGPR HHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EARPRHRRARNALHNRPSNRL HCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGKVIDGVSNAYLRWSTPDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGV CCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC REDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGD HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCHHHEEEEEEEEEECCCC EGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKA CCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC GVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTM CCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHCCCCCCCCEE LFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGRILQA EEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC NDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVAT CCCEEEEEEECCHHHHHHHHHCHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEE DVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAKGVAVTLVDWADVTRWKLINK CHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHH ALNLELSEPVETYSTSPHLYTDLDIPEDAQGQIIDLEKAASEKKRRQHRHGHDGSHHEKA HHCCCCCCCHHHHCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHH TRRRSRDASKDGDKARRKRIRRRNGKVVRGSSLNPAPHQKADQNRHAANSHHHDIVAGPR HHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EARPRHRRARNALHNRPSNRL HCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA