| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50842782
Identifier: 50842782
GI number: 50842782
Start: 1411519
End: 1412097
Strand: Direct
Name: 50842782
Synonym: PPA1301
Alternate gene names: NA
Gene position: 1411519-1412097 (Clockwise)
Preceding gene: 50842781
Following gene: 50842785
Centisome position: 55.13
GC content: 60.97
Gene sequence:
>579_bases GTGGGAAGCACTAACCGACCCCAACAACCCAAGATCAAACAGGCCCTGCCCGGGAACGCCGAGCAGCCCGTGATCGCGAA GCCATGCTCCGAGATGACCGATGATTTTAGGGGCCATCTTCTTCAGCAGGGCTATCCCTCCGATACCAACAACGATGAAG GCGAGGATTTCTTCGCATCCGTTGTTTCCTTCTCCGGTGGGGCCGTTCATGCTGCCTTCTCGGGGTGGACGGCCAGCCAG CCGATGAGGTTGTCGGCGACCTGTCCTGAGGTTTCGATCAGTTCGACCTGTCCGGCCTGCCATGCGCGCGATGCGCCGGC CAGCAGTGATGCCGGGGCCCCTGCTGCGCGGCTGAGAGAAGCGACTTCAGTCAAGGCGGTGCGTAGCTCCTCGATGGCGC TTTCGATGTACCAGCCGCTGTCGGTACTGTCGGTGGCGGTGATAAGGGCGTCGGTGAGGTTGTTGACGGCATGGTCGAGA TCAGCGATGCTCGGTAAAGCTACGGGAGTCACGGTGTGTTTTCCTTCCAGGGATGCCTTCACTGGTAAAGGTTCCCTGGG TCCGGCCGATGTGCGGTGA
Upstream 100 bases:
>100_bases CCAGTCACCTACACCCCCGACTGCCCCTCGCGAAGACCCAACCAGCGAACCAAGTCCCCAATGCGCCCACCACGATCAGC ACACCCACGGCGACCACCAG
Downstream 100 bases:
>100_bases TTTAAGAAAGATGCTCCGCATCAAGTCGTTTGAGTCAGGAAAATTCGGCTAGAACGGCACCAAGGTTCGCTCCCACTCGT CCAAACCTGTGGCGGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGSTNRPQQPKIKQALPGNAEQPVIAKPCSEMTDDFRGHLLQQGYPSDTNNDEGEDFFASVVSFSGGAVHAAFSGWTASQ PMRLSATCPEVSISSTCPACHARDAPASSDAGAPAARLREATSVKAVRSSSMALSMYQPLSVLSVAVIRASVRLLTAWSR SAMLGKATGVTVCFPSRDAFTGKGSLGPADVR
Sequences:
>Translated_192_residues MGSTNRPQQPKIKQALPGNAEQPVIAKPCSEMTDDFRGHLLQQGYPSDTNNDEGEDFFASVVSFSGGAVHAAFSGWTASQ PMRLSATCPEVSISSTCPACHARDAPASSDAGAPAARLREATSVKAVRSSSMALSMYQPLSVLSVAVIRASVRLLTAWSR SAMLGKATGVTVCFPSRDAFTGKGSLGPADVR >Mature_191_residues GSTNRPQQPKIKQALPGNAEQPVIAKPCSEMTDDFRGHLLQQGYPSDTNNDEGEDFFASVVSFSGGAVHAAFSGWTASQP MRLSATCPEVSISSTCPACHARDAPASSDAGAPAARLREATSVKAVRSSSMALSMYQPLSVLSVAVIRASVRLLTAWSRS AMLGKATGVTVCFPSRDAFTGKGSLGPADVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20049; Mature: 19918
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTNRPQQPKIKQALPGNAEQPVIAKPCSEMTDDFRGHLLQQGYPSDTNNDEGEDFFAS CCCCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VVSFSGGAVHAAFSGWTASQPMRLSATCPEVSISSTCPACHARDAPASSDAGAPAARLRE HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ATSVKAVRSSSMALSMYQPLSVLSVAVIRASVRLLTAWSRSAMLGKATGVTVCFPSRDAF HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC TGKGSLGPADVR CCCCCCCCCCCC >Mature Secondary Structure GSTNRPQQPKIKQALPGNAEQPVIAKPCSEMTDDFRGHLLQQGYPSDTNNDEGEDFFAS CCCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VVSFSGGAVHAAFSGWTASQPMRLSATCPEVSISSTCPACHARDAPASSDAGAPAARLRE HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ATSVKAVRSSSMALSMYQPLSVLSVAVIRASVRLLTAWSRSAMLGKATGVTVCFPSRDAF HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC TGKGSLGPADVR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA