| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842781
Identifier: 50842781
GI number: 50842781
Start: 1410818
End: 1411315
Strand: Direct
Name: 50842781
Synonym: PPA1300
Alternate gene names: NA
Gene position: 1410818-1411315 (Clockwise)
Preceding gene: 50842780
Following gene: 50842782
Centisome position: 55.1
GC content: 65.46
Gene sequence:
>498_bases GTGCGTCTATACCGCGCTGTTCTTACCCACACCGACATCCAGATCACCGTCCGCATCTGGAGCACCACCGACCACGACTG GACCTGGACTCCCCTCGACACCTGGACCCCCGACCCGACCCCGACCACACCAGCCCAACTGGCCGACGAACTCCACCGAC ACGGATGGACCACCCCCGAGGACCCCACCACCCTCACCAAGGTGACTGTGATCCCCGAGAACTGGCAGGCCCTCGTCGAC CACGCCCTCGCTGCCCGAAACCACCAAGCCAACCAGCTGCGCGTCGCCGAGAACATCCTCACCGACATCCTCGGCGACGC CGCCGACGCTGGCCTTTCCGTGACCTTCCTCGCCCAGGCCGCCGGATTGTCCCGAGCTGCCTTCTACAAACGCAGCGCTA AGACCATCAACTCTATGAGGCACGCCGACCAGCCGCGCGAAGACCCCTCCCAGCTCACCCGAGCCGAGAAAACAGCACTC AGCCTGGGCGACGAGTGA
Upstream 100 bases:
>100_bases TCCAGCCCGCCCTGTTCGAGCTAGCCGACTGCGCATGAGACCCCACACAAACATGGTTGAATCGAAGGGCTCAGCCAGCA GCCAGTTACCAGGAGTCCCC
Downstream 100 bases:
>100_bases TCCTCACACCTCCTGCGACAGCCCGGCCGTGGAGCCTTCCCACACGTGTCTAGCCAGCACTGACCGGGAAAACCTATTCG CGGCACCACACCGGGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MRLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTPAQLADELHRHGWTTPEDPTTLTKVTVIPENWQALVD HALAARNHQANQLRVAENILTDILGDAADAGLSVTFLAQAAGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTAL SLGDE
Sequences:
>Translated_165_residues MRLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTPAQLADELHRHGWTTPEDPTTLTKVTVIPENWQALVD HALAARNHQANQLRVAENILTDILGDAADAGLSVTFLAQAAGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTAL SLGDE >Mature_165_residues MRLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTPAQLADELHRHGWTTPEDPTTLTKVTVIPENWQALVD HALAARNHQANQLRVAENILTDILGDAADAGLSVTFLAQAAGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTAL SLGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18414; Mature: 18414
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTPAQLADELHRHGWTTPE CHHHHHHHHCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC DPTTLTKVTVIPENWQALVDHALAARNHQANQLRVAENILTDILGDAADAGLSVTFLAQA CCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTALSLGDE HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLYRAVLTHTDIQITVRIWSTTDHDWTWTPLDTWTPDPTPTTPAQLADELHRHGWTTPE CHHHHHHHHCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC DPTTLTKVTVIPENWQALVDHALAARNHQANQLRVAENILTDILGDAADAGLSVTFLAQA CCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AGLSRAAFYKRSAKTINSMRHADQPREDPSQLTRAEKTALSLGDE HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA