| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842738
Identifier: 50842738
GI number: 50842738
Start: 1364738
End: 1366054
Strand: Direct
Name: 50842738
Synonym: PPA1260
Alternate gene names: NA
Gene position: 1364738-1366054 (Clockwise)
Preceding gene: 50842716
Following gene: 50842739
Centisome position: 53.3
GC content: 60.36
Gene sequence:
>1317_bases GTGCCATTTCGTGACGCCAAAACCGCTCGCCAAGGATCCCGAGCTGCGCTGTTTTCTGCGGCAGGTGCCATCGTGCTGTG GACAGTGGGTCGACTCGTCATGCTTCACGTCTTTATCCAGCCGTCATCGAACTACATCACGGGTGACCTCCGGTACTACC TGTGGTGGATGTCGAGCGGACAACCAGATTCGTCCGTCCTGCCGGAATACCCGCTGCCTGTTGTGTGGTTCATGCGAACC CTCTATTGGGCCGGAGGCGACACCTACTTCCCTATGGCCTTTTCAATGACGATGCTGCTACTCGACGCCATCCTCGCAGT GGCGATGTGGCATGACGGCCATCGCGCGGGGGCACTGTGGTGGATCGTCCTGGTGCCCTTCCTTGGGCCGATCATGTGGA ATCGCTTCGACATGGTTCCTGCAGTCTGCATGGGACTGGCAGCCTTGTGGTACCGACGCCATCCGGCAGCCTGCGGCGCC ATGATCGCATTAGGTGCCGCGACAAAATTATGGCCTGCCCTCCTCATCTTGCCTATGATCTCCCGACATAGAGCTGCCGT GCGGCGTCTCATCGCCTTCACTATCACTGGTTTTGGGCTCGCCCTGGCATCACTTCTCGCGGGCGGCTGGGAACGTCTCG TCTCACCGCTGACGTGGCAGTCCGGCCGCGGCCTGCAGATCGAATCGGTGCCCGCCACTATTCCGATGCTCCACTATTTC CGCAACCCTCACGGCGACCACACCGTCAGGATGTCGAGCTATAACGCATACGAGATCTTCGGCCCAAGCGTGGCTAGCTG GAAGTCCGTCTCCACCGGCCTCATGGTGCTCGCGGTCGCCCTAGCCATCGGTTTGGCCGTTGTCTCGTGGCACCGAAACG GCCTTGATCACCGGACCGCTGTCATGGCAGACCTCGTCATCATTGGCGCCCTCATCGTGGCTAACAAGACCCTGTCTCCA CAGTATTTCATTTGGTGGGCCGCTCCGACTGCAATGATCCTGGATCGTGTCTCGGCCGAGGCCAAGGACCCTGGTGATTC CGACGCCCTATCCTGGGCACGCACGTGGTGCTGGATCGTCGCCGTGCTGATGGCCGTCACCACCTTCATGACCCAGCAGG TGTACCCACTGCACTACCAAAAGATCCTCGGGGGTTCATCAAGTACCGGCTGGTTGCTCGTCAGTCGCAACATGCTGGTC GTCATGACCTTTGCGGCGTGCATCGCAACGTTGGTGGCAAGCCTTCGTATGCACGTGCCCGCACAGCCGACCGTAACGCC AGCGAGACCGCGTCACGCCGCACTTAATGAACGGTGA
Upstream 100 bases:
>100_bases CCGCCCTCCGGAGGCGGGAGCGAGGGTTCGAATCCCTCCGGGAGCGCTCGAGCTATGTCCTTAGCGGCGTACCTGGATTT ATCAGGTAGGGTGTCAGTTC
Downstream 100 bases:
>100_bases TTTATATCACATTTTGGGGATTGGCGCCAGTTGTTCCCCGATATGTCTAAATTGTTGGGATGACACGGCTAATCCGGCTA CCATCATCACGTCTGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRT LYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGA MIALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSP QYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLV VMTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER
Sequences:
>Translated_438_residues MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRT LYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGA MIALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSP QYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLV VMTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER >Mature_437_residues PFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRTL YWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAM IALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYFR NPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSPQ YFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVV MTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48422; Mature: 48290
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG CCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECEEEEEEEECCC QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALW CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA CCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCC AQPTVTPARPRHAALNER CCCCCCCCCCCCCCCCCC >Mature Secondary Structure PFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG CCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECEEEEEEEECCC QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALW CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA CCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCC AQPTVTPARPRHAALNER CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA