Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842738

Identifier: 50842738

GI number: 50842738

Start: 1364738

End: 1366054

Strand: Direct

Name: 50842738

Synonym: PPA1260

Alternate gene names: NA

Gene position: 1364738-1366054 (Clockwise)

Preceding gene: 50842716

Following gene: 50842739

Centisome position: 53.3

GC content: 60.36

Gene sequence:

>1317_bases
GTGCCATTTCGTGACGCCAAAACCGCTCGCCAAGGATCCCGAGCTGCGCTGTTTTCTGCGGCAGGTGCCATCGTGCTGTG
GACAGTGGGTCGACTCGTCATGCTTCACGTCTTTATCCAGCCGTCATCGAACTACATCACGGGTGACCTCCGGTACTACC
TGTGGTGGATGTCGAGCGGACAACCAGATTCGTCCGTCCTGCCGGAATACCCGCTGCCTGTTGTGTGGTTCATGCGAACC
CTCTATTGGGCCGGAGGCGACACCTACTTCCCTATGGCCTTTTCAATGACGATGCTGCTACTCGACGCCATCCTCGCAGT
GGCGATGTGGCATGACGGCCATCGCGCGGGGGCACTGTGGTGGATCGTCCTGGTGCCCTTCCTTGGGCCGATCATGTGGA
ATCGCTTCGACATGGTTCCTGCAGTCTGCATGGGACTGGCAGCCTTGTGGTACCGACGCCATCCGGCAGCCTGCGGCGCC
ATGATCGCATTAGGTGCCGCGACAAAATTATGGCCTGCCCTCCTCATCTTGCCTATGATCTCCCGACATAGAGCTGCCGT
GCGGCGTCTCATCGCCTTCACTATCACTGGTTTTGGGCTCGCCCTGGCATCACTTCTCGCGGGCGGCTGGGAACGTCTCG
TCTCACCGCTGACGTGGCAGTCCGGCCGCGGCCTGCAGATCGAATCGGTGCCCGCCACTATTCCGATGCTCCACTATTTC
CGCAACCCTCACGGCGACCACACCGTCAGGATGTCGAGCTATAACGCATACGAGATCTTCGGCCCAAGCGTGGCTAGCTG
GAAGTCCGTCTCCACCGGCCTCATGGTGCTCGCGGTCGCCCTAGCCATCGGTTTGGCCGTTGTCTCGTGGCACCGAAACG
GCCTTGATCACCGGACCGCTGTCATGGCAGACCTCGTCATCATTGGCGCCCTCATCGTGGCTAACAAGACCCTGTCTCCA
CAGTATTTCATTTGGTGGGCCGCTCCGACTGCAATGATCCTGGATCGTGTCTCGGCCGAGGCCAAGGACCCTGGTGATTC
CGACGCCCTATCCTGGGCACGCACGTGGTGCTGGATCGTCGCCGTGCTGATGGCCGTCACCACCTTCATGACCCAGCAGG
TGTACCCACTGCACTACCAAAAGATCCTCGGGGGTTCATCAAGTACCGGCTGGTTGCTCGTCAGTCGCAACATGCTGGTC
GTCATGACCTTTGCGGCGTGCATCGCAACGTTGGTGGCAAGCCTTCGTATGCACGTGCCCGCACAGCCGACCGTAACGCC
AGCGAGACCGCGTCACGCCGCACTTAATGAACGGTGA

Upstream 100 bases:

>100_bases
CCGCCCTCCGGAGGCGGGAGCGAGGGTTCGAATCCCTCCGGGAGCGCTCGAGCTATGTCCTTAGCGGCGTACCTGGATTT
ATCAGGTAGGGTGTCAGTTC

Downstream 100 bases:

>100_bases
TTTATATCACATTTTGGGGATTGGCGCCAGTTGTTCCCCGATATGTCTAAATTGTTGGGATGACACGGCTAATCCGGCTA
CCATCATCACGTCTGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRT
LYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGA
MIALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF
RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSP
QYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLV
VMTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER

Sequences:

>Translated_438_residues
MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRT
LYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGA
MIALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF
RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSP
QYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLV
VMTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER
>Mature_437_residues
PFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSGQPDSSVLPEYPLPVVWFMRTL
YWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALWWIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAM
IALGAATKLWPALLILPMISRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYFR
NPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTAVMADLVIIGALIVANKTLSPQ
YFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIVAVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVV
MTFAACIATLVASLRMHVPAQPTVTPARPRHAALNER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48422; Mature: 48290

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG
CCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECEEEEEEEECCC
QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALW
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH
RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA
CCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCC
AQPTVTPARPRHAALNER
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFRDAKTARQGSRAALFSAAGAIVLWTVGRLVMLHVFIQPSSNYITGDLRYYLWWMSSG
CCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECEEEEEEEECCC
QPDSSVLPEYPLPVVWFMRTLYWAGGDTYFPMAFSMTMLLLDAILAVAMWHDGHRAGALW
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WIVLVPFLGPIMWNRFDMVPAVCMGLAALWYRRHPAACGAMIALGAATKLWPALLILPMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRHRAAVRRLIAFTITGFGLALASLLAGGWERLVSPLTWQSGRGLQIESVPATIPMLHYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH
RNPHGDHTVRMSSYNAYEIFGPSVASWKSVSTGLMVLAVALAIGLAVVSWHRNGLDHRTA
CCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VMADLVIIGALIVANKTLSPQYFIWWAAPTAMILDRVSAEAKDPGDSDALSWARTWCWIV
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AVLMAVTTFMTQQVYPLHYQKILGGSSSTGWLLVSRNMLVVMTFAACIATLVASLRMHVP
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCC
AQPTVTPARPRHAALNER
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA