| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is tyrA [H]
Identifier: 50842688
GI number: 50842688
Start: 1315636
End: 1316907
Strand: Direct
Name: tyrA [H]
Synonym: PPA1208
Alternate gene names: 50842688
Gene position: 1315636-1316907 (Clockwise)
Preceding gene: 50842687
Following gene: 50842689
Centisome position: 51.39
GC content: 60.85
Gene sequence:
>1272_bases GTGAGAACTCCCTCGACCTGCCCAATAACGCGCCGGTATCCGAGGTCGTGCGAGCTGCGGCACATGTCCTTGACGTTGAG CCCGCGAACCTTGAGGTGGGTTTGCTTAACCGCCACGCCTCGACGCGTCGTCACTTCCGACGTCTCGACGCCGCGACCGT GTTGGAGGCCGACGGTGACGGATCCTAATCGCGTCGAGCCGACGTTAACCGGACCGGTCCTTATCGTTGGTGTCGGCCTT ATTGGGGCATCCATCGGTAAGGCCCTGATGCGGGAGGGAACCGATGTTCATCTGTGGGACATCGATCGCGATAATTCCCT CATTGCAGCCGGGCACGGAGCGGGCAGACTCGGTAACCTGGCTGACGATGCGTACCGGATGATCGTGATCGCGACCCCAC CGGCCGTTGTCGCGCAGACGGTCGTTGAGCGGCTGACGCGACATCCCCAAGCCGTGGTCACCGACACCGCGTCAGTGAAG GGGGCTGTGTTGGCCGAGTTGACCACGCTGGCTACCGAGCACGAAATCGACATTTCCCGCTATGTGGGTTCCCACCCCAT GGCCGGAACCCAGTGCACCGGCCCTCTGACAGCCTCCACCGAACTCTTCGTCGACCGCACCTGGGTGGTAGCCCCTCGCA CCGACAACCGTTACGATGACGTTCAACAAGTCGTCGCTCTGGCCCGGGCCTGCGGTGCTCGGGTGGTGAGCATGGATGCC CACGAGCACGATCGAGCGGTCGCGGAGGTGTCTCACCTACCCCATCTCATGAGCATCCTCACTGCGGCAAATTTGCGCCG TGCTCGTCCTGAGCACCTGAGCCTCGCAGGGCCCGGCATTCGCGACGTCACCCGGATCGCTCGTTCCCAGACGACAATGT GGCGTCAGATCCTCAGTTCCAACTGTGTTGAGGTCCGCAGCCAGTTGGAAGCTATTCGTGACGACCTCGATGACTTGCTG TCTCGTCTTAACGATTCGGAACGCTTAGAAGAGTTCCTCAGCGTTGGTCAGGCCGGCGCCCGCAAGGTAGCAGGTAAGCA TGGGCATCAGATGGTGGAGACGACTGCCGTCGTCGTCGAGATTCCGGACACCCCTGGTGCTTTGGCACGATTATTTGCTG ACGTCGAAGCTGCTGGAATCAATATCGAAGACTTGTCGGTGGAACATAATCCAGCCCGTGAGACTGGTTTCTTGTCGATT GACGTTGCCCCGAGTCGTGCCGAACAGTTGACCGCGTCGATGCGCAATCACGGCTGGTCGGTACGATCCTGA
Upstream 100 bases:
>100_bases GCCGAGCTTGGCTTGGTCCCCTCGGAGGATCGCTTTTACACGATTGATTTCGACGGTTCTGTACGTGCCGGCACAGGCCC CATCCTGATGGGTGCAACCG
Downstream 100 bases:
>100_bases CACGTGTCGGTCGATGCCGATAGTCTCGCCCCGTCAGATCGCCATCGTAAAGCAGGCAGAACGTGTCAACCTCACCTCTC GTCATTGCCATCGACGGGCC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MRTPSTCPITRRYPRSCELRHMSLTLSPRTLRWVCLTATPRRVVTSDVSTPRPCWRPTVTDPNRVEPTLTGPVLIVGVGL IGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLGNLADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVK GAVLAELTTLATEHEIDISRYVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSMDA HEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQILSSNCVEVRSQLEAIRDDLDDLL SRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVVVEIPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSI DVAPSRAEQLTASMRNHGWSVRS
Sequences:
>Translated_423_residues MRTPSTCPITRRYPRSCELRHMSLTLSPRTLRWVCLTATPRRVVTSDVSTPRPCWRPTVTDPNRVEPTLTGPVLIVGVGL IGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLGNLADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVK GAVLAELTTLATEHEIDISRYVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSMDA HEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQILSSNCVEVRSQLEAIRDDLDDLL SRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVVVEIPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSI DVAPSRAEQLTASMRNHGWSVRS >Mature_423_residues MRTPSTCPITRRYPRSCELRHMSLTLSPRTLRWVCLTATPRRVVTSDVSTPRPCWRPTVTDPNRVEPTLTGPVLIVGVGL IGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLGNLADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVK GAVLAELTTLATEHEIDISRYVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSMDA HEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQILSSNCVEVRSQLEAIRDDLDDLL SRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVVVEIPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSI DVAPSRAEQLTASMRNHGWSVRS
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 46101; Mature: 46101
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPSTCPITRRYPRSCELRHMSLTLSPRTLRWVCLTATPRRVVTSDVSTPRPCWRPTVT CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCCC DPNRVEPTLTGPVLIVGVGLIGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLGNL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCC ADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVKGAVLAELTTLATEHEIDISR CCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHH YVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSMDA HHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECC HEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQILSS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH NCVEVRSQLEAIRDDLDDLLSRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVVVE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEEE IPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSIDVAPSRAEQLTASMRNHGWS CCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCC VRS CCC >Mature Secondary Structure MRTPSTCPITRRYPRSCELRHMSLTLSPRTLRWVCLTATPRRVVTSDVSTPRPCWRPTVT CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCCC DPNRVEPTLTGPVLIVGVGLIGASIGKALMREGTDVHLWDIDRDNSLIAAGHGAGRLGNL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCC ADDAYRMIVIATPPAVVAQTVVERLTRHPQAVVTDTASVKGAVLAELTTLATEHEIDISR CCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHH YVGSHPMAGTQCTGPLTASTELFVDRTWVVAPRTDNRYDDVQQVVALARACGARVVSMDA HHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECC HEHDRAVAEVSHLPHLMSILTAANLRRARPEHLSLAGPGIRDVTRIARSQTTMWRQILSS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH NCVEVRSQLEAIRDDLDDLLSRLNDSERLEEFLSVGQAGARKVAGKHGHQMVETTAVVVE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEEE IPDTPGALARLFADVEAAGINIEDLSVEHNPARETGFLSIDVAPSRAEQLTASMRNHGWS CCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCC VRS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA