Click here to switch to the map view.

The map label for this gene is 50842680

Identifier: 50842680

GI number: 50842680

Start: 1307060

End: 1307845

Strand: Reverse

Name: 50842680

Synonym: PPA1200

Alternate gene names: NA

Gene position: 1307845-1307060 (Counterclockwise)

Preceding gene: 50842682

Following gene: 50842666

Centisome position: 51.08

GC content: 59.8

Gene sequence:

>786_bases
GTGGCCTTCGGCGGCTGGAATGACGCCGGAACGGCCGCTACCCAGGCGGCGAGTCTCATCGCTGAGTATTCCGACGCGAA
AATATGGCGCACGATTGACGGCGAGGTGTTTCACGACTTTCGTCAAACCCGCCCCGCCATCACCGTCATGAACGACCTCG
AAATCGTCAGTTGGCCGAGTACCGCCATCAGGGTCGGGAGATGGCAGGGCCAACCCATCGTGGTCGTCGATGGGCCTGAG
CCGAGTTTGCGCTGGCGGACTTACTGCTTCCGGCTGCTACGGCGGCTGCGTAAACTCAATCCAGCTGGCCTTGTTGTTCT
GGGCGCGATGGCCACCGACGTGGCCCACACACGACAGCTTCCAGTCATGGTGTCTGCCACCGATCCCAATCTCATCAGCG
AGCTGGGGGCAGAGAAACTCGAATATGACGGGCCTACTGGTATCCCCTTTGTCTTCGTTACCGAGGCACGTCGTCACGGA
ATGAATGCCATCGGTCTATGGGTGGGAGTGCCACAGTATGCTTGTGAGTCGCTTTGTCCGCCCGCGGTGCAGGCCCTCTT
GGTGCGGATCGAGGAACTCACTGGGATCGCGATCCCACAAGCTGGACTCGAAGAGGATAAACGGGATTGGGTTGCCGCAA
TCGATGAGGCCTTAGTCGATCACCCCGAGCTGGCCGAATACATCGCAGCGTTGGAGACCGAGCAGGATGCTGCGCTCTCG
GAGGGACTGACAGGAGATGTCCTCGCGGTAGAGTTCCAGTCCTATCTACGCCATCGCGGTCATTAA

Upstream 100 bases:

>100_bases
GCTGGGACACAGCGGTGCGAAGGGCCGTGAGTCGCAGACGAAGGCGGGGGCTAACCTTGGCACCATGCGATTTCGACACA
TGGACCGGCCATGGGTCGTA

Downstream 100 bases:

>100_bases
CACTGTGCGCGGACTGTCAGTGGGCACATACCTGCGCAGCCAAAGCCCGGTTGCGCAGTGAAGCGACGACGTGGTCGGGG
TTGTCGGAACGGTACACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAFGGWNDAGTAATQAASLIAEYSDAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPSTAIRVGRWQGQPIVVVDGPE
PSLRWRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQLPVMVSATDPNLISELGAEKLEYDGPTGIPFVFVTEARRHG
MNAIGLWVGVPQYACESLCPPAVQALLVRIEELTGIAIPQAGLEEDKRDWVAAIDEALVDHPELAEYIAALETEQDAALS
EGLTGDVLAVEFQSYLRHRGH

Sequences:

>Translated_261_residues
MAFGGWNDAGTAATQAASLIAEYSDAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPSTAIRVGRWQGQPIVVVDGPE
PSLRWRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQLPVMVSATDPNLISELGAEKLEYDGPTGIPFVFVTEARRHG
MNAIGLWVGVPQYACESLCPPAVQALLVRIEELTGIAIPQAGLEEDKRDWVAAIDEALVDHPELAEYIAALETEQDAALS
EGLTGDVLAVEFQSYLRHRGH
>Mature_260_residues
AFGGWNDAGTAATQAASLIAEYSDAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPSTAIRVGRWQGQPIVVVDGPEP
SLRWRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQLPVMVSATDPNLISELGAEKLEYDGPTGIPFVFVTEARRHGM
NAIGLWVGVPQYACESLCPPAVQALLVRIEELTGIAIPQAGLEEDKRDWVAAIDEALVDHPELAEYIAALETEQDAALSE
GLTGDVLAVEFQSYLRHRGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28684; Mature: 28553

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGGWNDAGTAATQAASLIAEYSDAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPS
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEEECCCEEEECCH
TAIRVGRWQGQPIVVVDGPEPSLRWRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQL
HHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC
PVMVSATDPNLISELGAEKLEYDGPTGIPFVFVTEARRHGMNAIGLWVGVPQYACESLCP
CEEEECCCCHHHHHHCHHHCCCCCCCCCCEEEEECHHHCCCCEEHHHHCCHHHHHHHCCH
PAVQALLVRIEELTGIAIPQAGLEEDKRDWVAAIDEALVDHPELAEYIAALETEQDAALS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
EGLTGDVLAVEFQSYLRHRGH
CCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFGGWNDAGTAATQAASLIAEYSDAKIWRTIDGEVFHDFRQTRPAITVMNDLEIVSWPS
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEEECCCEEEECCH
TAIRVGRWQGQPIVVVDGPEPSLRWRTYCFRLLRRLRKLNPAGLVVLGAMATDVAHTRQL
HHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCC
PVMVSATDPNLISELGAEKLEYDGPTGIPFVFVTEARRHGMNAIGLWVGVPQYACESLCP
CEEEECCCCHHHHHHCHHHCCCCCCCCCCEEEEECHHHCCCCEEHHHHCCHHHHHHHCCH
PAVQALLVRIEELTGIAIPQAGLEEDKRDWVAAIDEALVDHPELAEYIAALETEQDAALS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
EGLTGDVLAVEFQSYLRHRGH
CCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA