Click here to switch to the map view.

The map label for this gene is 50842666

Identifier: 50842666

GI number: 50842666

Start: 1293265

End: 1294215

Strand: Reverse

Name: 50842666

Synonym: PPA1186

Alternate gene names: NA

Gene position: 1294215-1293265 (Counterclockwise)

Preceding gene: 50842680

Following gene: 50842665

Centisome position: 50.55

GC content: 54.99

Gene sequence:

>951_bases
ATGTACGACCTCGGTTCCAGCCAGCTGCCGACTAGTTTCGACCCCGCTACGGACTCCGACCAGCACTCGCTGCGCGAGTT
CATTGACCTGGTCGCTGATGCTGGATATGTCGTCGACTCCGATGAGCATGGTGACGACCCCGAACTCATCGCCCCTGACG
GCTCTGCCGTGGAAACCTGGCACGAAGATTATCCGTACCCCAACCTCATGGATCGTCGTGAATACGAAACCCAAAAGAGA
CTGCTGCAGATTGAACTACTGAAACTCCAGTACTCGATCGACGATACCGGTGAGCGTCACGTCATCATCTTTGAAGGTCG
CGACGCCGCAGGCAAAGGTGGGGCCATTAAGAGGTTTAGCGAACACCTCAATCCGCGTCGTTGCCGCGTCGTAGCCCTCG
ATAAGCCATCAGACCGCGAACTGGGCCAATGGAATTTCCAGCGTTACATTCAACACCTTCCTACGGCCGGCGAAATCGTG
CTCTTTGACCGCTCGTGGTATAATCGTGGCGGCGTCGAACGGGTCATGGGGTTTTGCACCGATGAAGAGCATCGAATCTT
CCTTCGGCAGGCTCCAATCCTCGAAGAGATGATGATCGAATCGGGCATTCATGTTACGAAGTTCTGGTTCTCGGTCACCC
GGCAGGAGCAACGCACCCGGTTCGCAATTCGTCAGCTCGATCCAGTTCGTCGCTGGAAGCTCTCCCCGATGGACTTGGAG
TCGCTGGGGCGCTGGGACGATTACACCCGTGCTAAAGAGGAGATGTTTGCCGCAACTGACACTGATGCCGCGCCGTGGAT
ATGTATCAAGTCTAATGACAAAAAACGCGCGCGTCTTAATGCGATGAGGTACTTCTTGTCGCAATATGATTACGAAGGCA
AAGATGTGGATGTCGTCGGACAGCCTGATCCGAGGTTAGTGCGTCGAGCTCGAGACATGGTTGGAGACTAA

Upstream 100 bases:

>100_bases
CTCGTGCTGGGCAGGTGGAGACCTGTTGAACATTGCAGAGTCACCGTCCGTTCACTGTGAGGCTGCCCCGCGCACCCCAT
GATCACGATAACGTGAGGCC

Downstream 100 bases:

>100_bases
ATGGTGCTGCCTCGACGAGGATGGGCGATAGTTGCCTTGATTACCGGGATTATGGCCAGCGGATGCGCAACCACGCCGCC
ACCTGACGACACCGGAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETWHEDYPYPNLMDRREYETQKR
LLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFSEHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIV
LFDRSWYNRGGVERVMGFCTDEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE
SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVGQPDPRLVRRARDMVGD

Sequences:

>Translated_316_residues
MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETWHEDYPYPNLMDRREYETQKR
LLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFSEHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIV
LFDRSWYNRGGVERVMGFCTDEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE
SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVGQPDPRLVRRARDMVGD
>Mature_316_residues
MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETWHEDYPYPNLMDRREYETQKR
LLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFSEHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIV
LFDRSWYNRGGVERVMGFCTDEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE
SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVGQPDPRLVRRARDMVGD

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 36873; Mature: 36873

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETW
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCHHHHH
HEDYPYPNLMDRREYETQKRLLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFS
HHCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHH
EHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIVLFDRSWYNRGGVERVMGFCT
HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC
DEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE
CCCCEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHH
SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVG
HCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
QPDPRLVRRARDMVGD
CCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYDLGSSQLPTSFDPATDSDQHSLREFIDLVADAGYVVDSDEHGDDPELIAPDGSAVETW
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCHHHHH
HEDYPYPNLMDRREYETQKRLLQIELLKLQYSIDDTGERHVIIFEGRDAAGKGGAIKRFS
HHCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHH
EHLNPRRCRVVALDKPSDRELGQWNFQRYIQHLPTAGEIVLFDRSWYNRGGVERVMGFCT
HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC
DEEHRIFLRQAPILEEMMIESGIHVTKFWFSVTRQEQRTRFAIRQLDPVRRWKLSPMDLE
CCCCEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHH
SLGRWDDYTRAKEEMFAATDTDAAPWICIKSNDKKRARLNAMRYFLSQYDYEGKDVDVVG
HCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
QPDPRLVRRARDMVGD
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]