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The map label for this gene is 50842647

Identifier: 50842647

GI number: 50842647

Start: 1268885

End: 1270168

Strand: Reverse

Name: 50842647

Synonym: PPA1167

Alternate gene names: NA

Gene position: 1270168-1268885 (Counterclockwise)

Preceding gene: 50842650

Following gene: 50842619

Centisome position: 49.61

GC content: 60.59

Gene sequence:

>1284_bases
ATGAACACGTTTGGCAGTTTATCGGGCAAGATGGGGCGTATGAGTCACGCACAAGCTCCGCAGTCCTTCGGCCGCGTCGA
TGATGACGGCACCGTTTACGTCCGAACTAGTGACGGGGAGAGGTCTGTCGGCCAGGTGCCGGACTCCACTAGCGAGGAAG
CCCTTGAATTCTTCGTGCGCCGCTATCGCGCCCTCGAGACCGAGGTGTCGCTGCTGGAATCACGAGTGAGCTCGGGCACC
GCCTCGCCGGAGGAGGCACGGTCGGCCGCCAGTAAACTCGTCACATCTATCCGTGAGGCCAATGCCGTTGGCGATCTGGA
ATCTCTCGCAGCCCGAGTGGAGGCATTGACCCCCACTATTGACGCCAAGGCGGAGACCCGCCGTGAGGAGCGCGCTGAAG
CTAAGGCCCGCGCCAAGCAAGCTAAGGAGGAGATGGTAGCCCAGGCAGAGGCTATTGCTGCTGGCAGTGACTGGCGTGGT
GGCATTGGAAAGTTCCGCGATCTACTTGACCAGTGGCGCCGTCTCCCCCGTATCGACAAGACGACTGACGACGAGTTGTG
GCACCGTTTTTCCGGTGCTCGCACCGCATTTACCCGTCGTCGCAAGCAGCACATGGCTGAGCAGAACCACCTGCGCGAGC
GCGCCCGCATCGTCAAGGAGCACATCATTGAGGAGGCTCGTCCGCTGGCCGAGTCGACCGCTTGGGGTGAGACCTCTCGC
CAGTTCCGCGACCTCATGAACCGATGGAAGGCCGCCGGACCTGCTCCCCGCGATGTCGATGACAAGCTCTGGAAGGAGTT
CCGCGCTATCCAGGACACGTTCTTCGACGCCCGCACCGCGGCCCAAAGCCAGCAGGATGAGGAATACCGCGGTAACCAGG
AGGTCAAAGAGCAGCTCCTTGACGAAGCAGAAAAGGATATTCTGCCCGTCAAGGACATTGAAGAGGCCAAAGTCAAGCTC
CGCGCATTCCTCGAAAAATTCAATGAGGTTGGTCGAGTTCCTCGCGACGCCATGAAACGTATTGACGCCCGCGTCCGTGA
CTTGGAGCGTCAGGTCCACTCCGCTGAGGAAGCCGAATGGAAACGCACCGATCCGCAGGCTCGCGAACGTGCTCGCGCCA
CCGTCGATATGTTCAGCGCCCACATCGACAAGCTGAACGCCCAGGTCGAGAAAGCTGAGGCCGCTGGTCGTACTAAGGAT
GCCGACAAGGCTCGCGAATCGATCAAGACCTACCAGACCTGGCTCGACGAGGCTCAGAAGGCACTCGACGAATTTAGCGC
CTGA

Upstream 100 bases:

>100_bases
TTCAGCGCCCATACCGAGATCGACGATGACGCACTCAGACCCCTGTTCGCGCGCTAGCAGATAGCAATTGGTCTGAAAAG
GACCTGTGATAAAGGACGCG

Downstream 100 bases:

>100_bases
TGGTCACCGCTGACGGCCTCGGAACACTTCCCAGACCCGGGGCCGTTGGCGTTCTAGGCAACCTTCAAGACTTCACACGG
AAGACGTCGTAAACCCCCGA

Product: putative DNA repair ATPase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVRRYRALETEVSLLESRVSSGT
ASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTIDAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRG
GIGKFRDLLDQWRRLPRIDKTTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR
QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLLDEAEKDILPVKDIEEAKVKL
RAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEWKRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKD
ADKARESIKTYQTWLDEAQKALDEFSA

Sequences:

>Translated_427_residues
MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVRRYRALETEVSLLESRVSSGT
ASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTIDAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRG
GIGKFRDLLDQWRRLPRIDKTTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR
QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLLDEAEKDILPVKDIEEAKVKL
RAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEWKRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKD
ADKARESIKTYQTWLDEAQKALDEFSA
>Mature_427_residues
MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVRRYRALETEVSLLESRVSSGT
ASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTIDAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRG
GIGKFRDLLDQWRRLPRIDKTTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR
QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLLDEAEKDILPVKDIEEAKVKL
RAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEWKRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKD
ADKARESIKTYQTWLDEAQKALDEFSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48590; Mature: 48590

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVR
CCCCCCCCCCHHHHHHHHCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RYRALETEVSLLESRVSSGTASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
DAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRGGIGKFRDLLDQWRRLPRIDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
TTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH
DEAEKDILPVKDIEEAKVKLRAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEW
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKDADKARESIKTYQTWLDEAQK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ALDEFSA
HHHHHCC
>Mature Secondary Structure
MNTFGSLSGKMGRMSHAQAPQSFGRVDDDGTVYVRTSDGERSVGQVPDSTSEEALEFFVR
CCCCCCCCCCHHHHHHHHCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RYRALETEVSLLESRVSSGTASPEEARSAASKLVTSIREANAVGDLESLAARVEALTPTI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
DAKAETRREERAEAKARAKQAKEEMVAQAEAIAAGSDWRGGIGKFRDLLDQWRRLPRIDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
TTDDELWHRFSGARTAFTRRRKQHMAEQNHLRERARIVKEHIIEEARPLAESTAWGETSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QFRDLMNRWKAAGPAPRDVDDKLWKEFRAIQDTFFDARTAAQSQQDEEYRGNQEVKEQLL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH
DEAEKDILPVKDIEEAKVKLRAFLEKFNEVGRVPRDAMKRIDARVRDLERQVHSAEEAEW
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRTDPQARERARATVDMFSAHIDKLNAQVEKAEAAGRTKDADKARESIKTYQTWLDEAQK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ALDEFSA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA