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The map label for this gene is yfeT [C]

Identifier: 50842619

GI number: 50842619

Start: 1239385

End: 1240257

Strand: Reverse

Name: yfeT [C]

Synonym: PPA1140

Alternate gene names: 50842619

Gene position: 1240257-1239385 (Counterclockwise)

Preceding gene: 50842647

Following gene: 50842618

Centisome position: 48.44

GC content: 58.88

Gene sequence:

>873_bases
ATGGATGACAGCCTGCTGCCTCGGATCGATATGGCCAGAACGACCATGCGTCCTGCAGAGGCCCAGGTTGCCGCCGTCAT
ACTGGCCAAGCCCGACTGGACACTAGCTGCTTCAACGAGCCAACTCGCTGAGGCTGCCGGCGTATCCCCCGCGACTGTCG
TGCGCTTTTGCCGAGCCCTTGGGATGAGTGGTTATCGGGAGCTTCGCACCGAGCTTGCGCGCGACTTATCTCGACGTACC
CTCGAGCTAGAGAGGTCCTCAGTGGCTGAGGGCACTATTACTCTCGACGACTCTCTAACCCAAATGATCACGAAGATCGC
GTTCCATGAGGCTCGCACGATTGAGAATACTGCGCGGGCCGTTGACGCCGACGAGCTTGAGGCTGTCGCCAGCGCTATCT
CGATTGCCCCGCGGACTGCGCTTTTCGGGGTCGGATCCAGCGGTCTTGTCGCAAGCGACCTATCTGAGAAACTGGAACGC
ATTGGCCTTGTCTGCCAGCATCATCAAGACACCCATATGCAGCTTGTTCATGCCGCATTGTGTAAACGTCCCTGCGTAGC
CTTAGGAATCTCTTTTAGCGGTAACACCCAAGAAGTCGTTGAGGCTCTCACCGTGGCGCAAAAGCACGGCGCTACTACCG
TCGCTATGACAGGCCTACCTGATTCTCCCGTCGGACGGCTTGCCGACCACGTCCTCGTCACTTCAGCACGCGAAACACAG
GTTCGCGCAGGTGCGATGTCCAGTCGGATGGCACAGCTAGCCGTTGTGGACTTTCTTTTCGCGCGCGTCGCCCAGCTGTG
CATGGATGACCTCGAGACCCTCCTGAGTAGTACGCGCACCGCGGTAAGCACGCACAGAAAGTCCCTCACGTAG

Upstream 100 bases:

>100_bases
TTGTGGTTCCATATCTGCGATGACACACCACGAAACGCGCCGCCCCCACGACGTGAAATGATTATACACAAAATCCAACT
TTAGTGGAAGGATGTTTCAC

Downstream 100 bases:

>100_bases
ACTTAACGCATGTCGTCACAGACCCTCAGCAAGACCTGGAAGTCGATCTGGTGGATTCCGTTCACCAAGGGGATCCTCGC
AATCGTTGCCGCAGTGGTGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMSGYRELRTELARDLSRRT
LELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLER
IGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQ
VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT

Sequences:

>Translated_290_residues
MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMSGYRELRTELARDLSRRT
LELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLER
IGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQ
VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT
>Mature_290_residues
MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMSGYRELRTELARDLSRRT
LELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLER
IGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQ
VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=282, Percent_Identity=34.0425531914894, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI87082369, Length=274, Percent_Identity=29.1970802919708, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788159, Length=256, Percent_Identity=28.90625, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87082130, Length=268, Percent_Identity=28.7313432835821, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31023; Mature: 31023

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRAL
CCCCCCCCHHHHHHHCCCCHHHEEEEEEECCCCEEECCHHHHHHHHCCCHHHHHHHHHHH
GMSGYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAAL
CCHHHHHHHHHHHHHCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CKRPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQ
HCCCHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHH
VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDSLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRAL
CCCCCCCCHHHHHHHCCCCHHHEEEEEEECCCCEEECCHHHHHHHHCCCHHHHHHHHHHH
GMSGYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VDADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAAL
CCHHHHHHHHHHHHHCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CKRPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQ
HCCCHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHH
VRAGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHRKSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]