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The map label for this gene is pep1B [H]

Identifier: 50842593

GI number: 50842593

Start: 1211284

End: 1213410

Strand: Reverse

Name: pep1B [H]

Synonym: PPA1114

Alternate gene names: 50842593

Gene position: 1213410-1211284 (Counterclockwise)

Preceding gene: 50842594

Following gene: 50842592

Centisome position: 47.39

GC content: 60.27

Gene sequence:

>2127_bases
ATGGCTCCTGCCTCCCCCGCCGACTCCCCTAAGTCAGCCCCTGCTCCTGAACCATCACCCGTACCGCCGGAATTTCCAGC
ACCGCGTCGTGCTGCCGAGCATGCCTTTGGCAATAATGCTCTTTTCACTGCCACGAGCGCCATTGATTCTCCTGGATATC
CCCCGCTACGCGGATTTGGACGTATCCCTGTACACAACGTCCGTCCCGAGGTCGAAAGTGGCCACCTGCCGATCTACTCG
GTCGTCAATGAGGAATTCGAGGTCACCGCGAATGTGTTCCGCGAAGGCCACGACGCCGTCGGGGCTAGTGTCGTTCTCAC
CGATCCCGAGGGCAACCGTCACCTCACTGACATGCACCAGGTCGAGCCCTGGGGACTAGACATCTGGAAAGCCCGAGTCT
CCGCTGACATCGAAGGCGACTGGACTATGCACGTTGAAGGCTGGTCAGACACCTGGGGCACGTGGCATCACAATGCCAAT
GCCAAGCTCGCCGCTGCCATCGACGTCGAACTGGTGTGCGCCGAAGGCCATGCCCTCATAAACGAGGCGGTCCGGCACGC
CGAGCAATCCGGGGATACTGACGCGATCACGGCTCTGCGCGAGACCGATGCCAACCTAACCCTTGACCGTGCCCCCGACT
CGCTACAACAGGTCATCAACACCTACGCGTTCTGCGAGGCCATGCGAGTCCATGCCCCGCGGCTGTTGACCTCGCCCACA
CTCCCGGCCCCGCTGCGGGTGGAGAGACGTCGGGCCCTCTACGGGTCCTGGTACGAGTTTTTCCCGCGCTCTCAGGGTGC
TTATGTCGATGCGGACGGTCACTGGGTTTCAGGTACTTTCGACACCTCCTGGGAGCGCCTGGACGCCGCCGCTGCGATGG
GATTCGACGTCGTCTACCTGCCGCCGATCCATCCCATTGGCACAGCCTTCCGCAAGGGCAAGGACAACACCCTGACCCCA
GGTCCGGACGATCCGGGATCGCCGTGGGCCATCGGATCGTCTGATGGCGGCCATGACACCATTCACCCCGACCTAGGCAC
CTTCGACGACCTCGACCGTTTCGTGGCCCACGCTCATGACCTAGGCATGGAGGTGGCCCTAGATTTTGCCTTGCAGGCCT
CCCCAGACCACCCGTGGGTACACCAGCACCCGGAGTGGTTCACGACCCGCGTTGATGGCACCATCGCCTATGCAGAAAAT
CCACCCAAAAAGTATCAGGACATCTACCCGATCAACTTCGACAATGACCCTGACGGCATCTACCAGGAATGCTTGCGGCT
GCTGGAGTTATGGATCTCCCACGGCGTGACGATTTTCCGCGTCGATAATCCACATACCAAGCCCCTGAATTTCTGGGCCT
GGCTCATGGAGCAGGTTCATCGTCGTCACCCCGAGGTCATCTTCCTGGCAGAGGCCTTCACCCGTCCCGAGATGATGGCT
GCCCTCGGCAAGGTGGGTTTCCAACAGGGTTACTCCTATTTCACCTGGCGCACCACCAAGTGGGAGCTCGAAGCGTACCT
CGACGAGGTCTCCCACCAGACCTCGCACTTCTACCGTCCAAACTTTTTCGTCAATACCCCAGACATCAACCCTATCTATC
TCAATGACGGCAATCCGGCCGGCTTCGCTATCCGCGCGATCCTAGCCGCGACGATGAGCCCGTCGTGGGGCATGTACTCC
GGATTTGAGATTTGCGAGCACGAGCCGCTGCCCGGACGCGAGGAGTACGCCCACTCCGAGAAGTACGAGTACCGGCCCCG
CGATTACGATTCCGAGCCGAACATCACGCTGCTCGTCACTCGCCTCAACGAGATCCGTCGGGCTCACCCGGCGTTGCAGC
AACTGCGTGACACTACGATCCATCACGCCCCACACGACAACGTCTTCGTGTTCTCCAAGAAAGCGGGAAATGACGTTGTG
ATCGTTGTTACCTCCTTGGATCCGGTATGGGGTGTTGAGTCTCAGATCATGCTCGATATGGCTGCCCTCGGCTTCGACAA
TGACGACACGTTCACCGTCCACGATGAGCTCACTGGAGCCGATTTCACGTGGGGCCAGCAAGCCTTCGTCAGGCTCTACC
CCGCTCAGCCCGCCCATATCCTGCATGTGCGAAAGACCACCTCATGA

Upstream 100 bases:

>100_bases
GTGGAGGATCAATAGGCGAGACCGCCGTCACGACGAGAATGGCTCCGACGACGAGGAGGTGCAGGTCACTCCTTCGGCCC
CAGAACCGTCACCCAAACCG

Downstream 100 bases:

>100_bases
CCCATGTCCCCTGCACCCCCGCCGCGGAGATCCCTGAGACCCTGGCTCCTACCGGGGCTCTCGGGCTGACCTCGGCCCAG
TTGCAGGCCAGACTCGATGA

Product: putative alpha-amylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 708; Mature: 707

Protein sequence:

>708_residues
MAPASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFGRIPVHNVRPEVESGHLPIYS
VVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQVEPWGLDIWKARVSADIEGDWTMHVEGWSDTWGTWHHNAN
AKLAAAIDVELVCAEGHALINEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT
LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYLPPIHPIGTAFRKGKDNTLTP
GPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHDLGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAEN
PPKKYQDIYPINFDNDPDGIYQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA
ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPAGFAIRAILAATMSPSWGMYS
GFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVTRLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVV
IVVTSLDPVWGVESQIMLDMAALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS

Sequences:

>Translated_708_residues
MAPASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFGRIPVHNVRPEVESGHLPIYS
VVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQVEPWGLDIWKARVSADIEGDWTMHVEGWSDTWGTWHHNAN
AKLAAAIDVELVCAEGHALINEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT
LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYLPPIHPIGTAFRKGKDNTLTP
GPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHDLGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAEN
PPKKYQDIYPINFDNDPDGIYQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA
ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPAGFAIRAILAATMSPSWGMYS
GFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVTRLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVV
IVVTSLDPVWGVESQIMLDMAALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS
>Mature_707_residues
APASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFGRIPVHNVRPEVESGHLPIYSV
VNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQVEPWGLDIWKARVSADIEGDWTMHVEGWSDTWGTWHHNANA
KLAAAIDVELVCAEGHALINEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPTL
PAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYLPPIHPIGTAFRKGKDNTLTPG
PDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHDLGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAENP
PKKYQDIYPINFDNDPDGIYQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMAA
LGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPAGFAIRAILAATMSPSWGMYSG
FEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVTRLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVVI
VVTSLDPVWGVESQIMLDMAALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS

Specific function: Could convert glycogen into units that may be subsequently converted into trehalose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 79386; Mature: 79255

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
RIPVHNVRPEVESGHLPIYSVVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQ
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHH
VEPWGLDIWKARVSADIEGDWTMHVEGWSDTWGTWHHNANAKLAAAIDVELVCAEGHALI
CCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEECCCHHHH
NEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT
HHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCC
LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYL
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHCCCEEEE
PPIHPIGTAFRKGKDNTLTPGPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHD
CCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAENPPKKYQDIYPINFDNDPDGI
CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHCCCCCCCCCCCCCHH
YQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA
HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHH
ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPA
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHEECCCEEEECCCCCEEEEECCCCC
GFAIRAILAATMSPSWGMYSGFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVT
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
RLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVVIVVTSLDPVWGVESQIMLDM
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHH
AALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS
HHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure 
APASPADSPKSAPAPEPSPVPPEFPAPRRAAEHAFGNNALFTATSAIDSPGYPPLRGFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
RIPVHNVRPEVESGHLPIYSVVNEEFEVTANVFREGHDAVGASVVLTDPEGNRHLTDMHQ
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHH
VEPWGLDIWKARVSADIEGDWTMHVEGWSDTWGTWHHNANAKLAAAIDVELVCAEGHALI
CCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEECCCHHHH
NEAVRHAEQSGDTDAITALRETDANLTLDRAPDSLQQVINTYAFCEAMRVHAPRLLTSPT
HHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCC
LPAPLRVERRRALYGSWYEFFPRSQGAYVDADGHWVSGTFDTSWERLDAAAAMGFDVVYL
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHCCCEEEE
PPIHPIGTAFRKGKDNTLTPGPDDPGSPWAIGSSDGGHDTIHPDLGTFDDLDRFVAHAHD
CCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LGMEVALDFALQASPDHPWVHQHPEWFTTRVDGTIAYAENPPKKYQDIYPINFDNDPDGI
CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHCCCCCCCCCCCCCHH
YQECLRLLELWISHGVTIFRVDNPHTKPLNFWAWLMEQVHRRHPEVIFLAEAFTRPEMMA
HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHH
ALGKVGFQQGYSYFTWRTTKWELEAYLDEVSHQTSHFYRPNFFVNTPDINPIYLNDGNPA
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHEECCCEEEECCCCCEEEEECCCCC
GFAIRAILAATMSPSWGMYSGFEICEHEPLPGREEYAHSEKYEYRPRDYDSEPNITLLVT
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
RLNEIRRAHPALQQLRDTTIHHAPHDNVFVFSKKAGNDVVIVVTSLDPVWGVESQIMLDM
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHH
AALGFDNDDTFTVHDELTGADFTWGQQAFVRLYPAQPAHILHVRKTTS
HHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10821190; 12000953 [H]