| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842555
Identifier: 50842555
GI number: 50842555
Start: 1172709
End: 1173926
Strand: Direct
Name: 50842555
Synonym: PPA1077
Alternate gene names: NA
Gene position: 1172709-1173926 (Clockwise)
Preceding gene: 50842554
Following gene: 50842556
Centisome position: 45.8
GC content: 60.67
Gene sequence:
>1218_bases ATGAGGACTGGCAGGTCGCCACCGACACCCTCGACCAGGTGTGCCGTAGCACTGGTTTGCAGCTGGTCCCTGATCCGGGT GGTGCGGCTTTCTATGGCCCGAAGGTCTCGGTGCAGGTTAGGGATGCCATCGGGCGTACCTGGCAGATGTCGACGATTCA GTATGACTTTAACCAGCCTGAGCGGTTCGACTTGGAATACGCGGCTGCTGACGGCACCCATCAGCGTCCGATCATGCTGC ACTCAGCCAAGTTGGGTAGTGTCGAGAGGTTTATTGGTGTGCTTACCGAGCATTACGCCGGTGCTTTCCCGGTATGGCTC TCTCCGGTCCAGGTGCGCTTGGTGCCGGTGGCTGAGGCCTTTAACGACTACGTCACCGGGTTCGCAGAGGTGTTGGGTTC CCGCGGGATTCGGGTCGAGACGGACCTGTCCTCGGACCGGTTTGGCAAGAAGATCCGCAACGCCTCTAAGGACAAGGTGC CTTTCATCCTCATCGCGGGCGGTGAGGATGCCGAGGCTGGTGCCGTATCCTTCCGGCTGCGTGATGGCTCTCAGGTCAAT GGCGTCGTCCTGGACGAGGCAGTGCGTATCATTGCAGCTTGGGACAGTCGGCACCGCAACGACGATCCGACTGCCGAGAC GCTGCGCGGAGTCGTTGATGACTGAGGATTACCGTCTCGAGTTCGCCGAGGAACTGGTCGGGGTTCCGGATCCCTTCAGG AGGTTCTGGACCCCGTATCGGATGGCGTATATCTCTGGTGAAAATAAGCCTCGAGGTAACCGGCCGGAGGATGGTTGTCC CTTCTGTAGAGCCCCGCAGCGTAGCGACGAGGACGCCCTTATCGTCCACCGTGGCGAGCACTGCTACGTCATTATGAACC TTTATCCCTACGGACCTGGGCACATGCTGGTATGCCCTTACCGCCACGTTGCTGGGTACGTCGATGCAACCCAAGACGAA GTCGTCGAGATGGCCGAGCTCACCCAGGATGCCATCCGGACCCTCCAGGAGGTGTCCCGTCCACAAGGGTTCAACGTAGG CATCAATCAGGGGGCATCCGGTGGTGCCGGGGTTGCCGCGCACCTGCATCAACACGTCATCCCGCGGTGGACCGGCGATA CCAACTTTCTGCCCATCGTTGCCGGGGTCCGTGCTGTACCGCAATTGCTCGGCGATGGGCGCCAGATGCTTGCCGATGCG TGGGTGGGTCATGCTTGA
Upstream 100 bases:
>100_bases TTCCTGTCGATCCTGGCCGATTTTGGCCTCAATGACTTTTACCTCGAGCTGTCTACTCGTGAGAGCGACAGCGCGAAAAA GGAGAAATTCATCGGTTCCG
Downstream 100 bases:
>100_bases GCACTTCCGTGCTGGCTGGGCCAAGGTCATGAATCCCATTGCCGACGCCTTGCTGAGAGCCCATGTCACCCCTGACGTGG TCACCTGGATCGGAACCATT
Product: putative HIT family protein
Products: NA
Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRTGRSPPTPSTRCAVALVCSWSLIRVVRLSMARRSRCRLGMPSGVPGRCRRFSMTLTSLSGSTWNTRLLTAPISVRSCC TQPSWVVSRGLLVCLPSITPVLSRYGSLRSRCAWCRWLRPLTTTSPGSQRCWVPAGFGSRRTCPRTGLARRSATPLRTRC LSSSSRAVRMPRLVPYPSGCVMALRSMASSWTRQCVSLQLGTVGTATTIRLPRRCAESLMTEDYRLEFAEELVGVPDPFR RFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDALIVHRGEHCYVIMNLYPYGPGHMLVCPYRHVAGYVDATQDE VVEMAELTQDAIRTLQEVSRPQGFNVGINQGASGGAGVAAHLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLADA WVGHA
Sequences:
>Translated_405_residues MRTGRSPPTPSTRCAVALVCSWSLIRVVRLSMARRSRCRLGMPSGVPGRCRRFSMTLTSLSGSTWNTRLLTAPISVRSCC TQPSWVVSRGLLVCLPSITPVLSRYGSLRSRCAWCRWLRPLTTTSPGSQRCWVPAGFGSRRTCPRTGLARRSATPLRTRC LSSSSRAVRMPRLVPYPSGCVMALRSMASSWTRQCVSLQLGTVGTATTIRLPRRCAESLMTEDYRLEFAEELVGVPDPFR RFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDALIVHRGEHCYVIMNLYPYGPGHMLVCPYRHVAGYVDATQDE VVEMAELTQDAIRTLQEVSRPQGFNVGINQGASGGAGVAAHLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLADA WVGHA >Mature_405_residues MRTGRSPPTPSTRCAVALVCSWSLIRVVRLSMARRSRCRLGMPSGVPGRCRRFSMTLTSLSGSTWNTRLLTAPISVRSCC TQPSWVVSRGLLVCLPSITPVLSRYGSLRSRCAWCRWLRPLTTTSPGSQRCWVPAGFGSRRTCPRTGLARRSATPLRTRC LSSSSRAVRMPRLVPYPSGCVMALRSMASSWTRQCVSLQLGTVGTATTIRLPRRCAESLMTEDYRLEFAEELVGVPDPFR RFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDALIVHRGEHCYVIMNLYPYGPGHMLVCPYRHVAGYVDATQDE VVEMAELTQDAIRTLQEVSRPQGFNVGINQGASGGAGVAAHLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLADA WVGHA
Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: =2.7.7.53 [H]
Molecular weight: Translated: 44821; Mature: 44821
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGRSPPTPSTRCAVALVCSWSLIRVVRLSMARRSRCRLGMPSGVPGRCRRFSMTLTSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECC SGSTWNTRLLTAPISVRSCCTQPSWVVSRGLLVCLPSITPVLSRYGSLRSRCAWCRWLRP CCCCCCCEEEECCCHHHHHCCCCHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHCC LTTTSPGSQRCWVPAGFGSRRTCPRTGLARRSATPLRTRCLSSSSRAVRMPRLVPYPSGC CCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHCCCCCEEECCCCCCCCCHH VMALRSMASSWTRQCVSLQLGTVGTATTIRLPRRCAESLMTEDYRLEFAEELVGVPDPFR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHH RFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDALIVHRGEHCYVIMNLYPYGPG HHCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCC HMLVCPYRHVAGYVDATQDEVVEMAELTQDAIRTLQEVSRPQGFNVGINQGASGGAGVAA CEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH HLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLADAWVGHA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MRTGRSPPTPSTRCAVALVCSWSLIRVVRLSMARRSRCRLGMPSGVPGRCRRFSMTLTSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECC SGSTWNTRLLTAPISVRSCCTQPSWVVSRGLLVCLPSITPVLSRYGSLRSRCAWCRWLRP CCCCCCCEEEECCCHHHHHCCCCHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHCC LTTTSPGSQRCWVPAGFGSRRTCPRTGLARRSATPLRTRCLSSSSRAVRMPRLVPYPSGC CCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHCCCCCEEECCCCCCCCCHH VMALRSMASSWTRQCVSLQLGTVGTATTIRLPRRCAESLMTEDYRLEFAEELVGVPDPFR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHH RFWTPYRMAYISGENKPRGNRPEDGCPFCRAPQRSDEDALIVHRGEHCYVIMNLYPYGPG HHCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCC HMLVCPYRHVAGYVDATQDEVVEMAELTQDAIRTLQEVSRPQGFNVGINQGASGGAGVAA CEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH HLHQHVIPRWTGDTNFLPIVAGVRAVPQLLGDGRQMLADAWVGHA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]