| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yxiO [H]
Identifier: 50842526
GI number: 50842526
Start: 1136612
End: 1137955
Strand: Direct
Name: yxiO [H]
Synonym: PPA1044
Alternate gene names: 50842526
Gene position: 1136612-1137955 (Clockwise)
Preceding gene: 50842525
Following gene: 50842529
Centisome position: 44.39
GC content: 58.04
Gene sequence:
>1344_bases ATGAGCCACACCGACGTGCCGGCCGATCAACGCAAACGCGTCTTCGCCTGGGCCATGTGGGATCCAGGAACCCAGCCCTT CGCTTCGGTCATCACCACCTTCGTCTTTGCCGTCTATCTTGTCGGCGACGCCTTCGGGTCCAAAGACCGCACTGTCACTG CGCTGTCATGGACCATGACTTTGGCGGGCCTGACCATTGCCTTGCTGGCACCTGTCGTGGGGCAATGGGCAGGTCGACGA GGCCGGCAGGTGACTGCCCTGAAATGGCTTACCTGGACTCTCGCGGTGATGTCGGGATTGCTCTTTTTCGTCAAGCCTCA TCCGTCCTATCTCGTCTTCGGATTGGTGCTGTTGGGCATTGGGACGGTCATCTCGGACGTCGGGAGCTCCCTATACAACG GCATGCTTGATGACGTTGCAGAGTCTGGCAAAGTCGGACGGATTTCCGGTCTCGGATGGGGTATGGGCTATCTGGGTGGG ATTATTGCCTTACTCGTCATCTACATCGCCTGGATCAAACCAAAAGTGGGTTGGTTTGGAGTAACCAACCACGAAGGCAT GAACATCCGCGTGGCGATGCTGTTTTGTGCGGTATGGATCCTGGCGCTGACCTTACCCACCTTTTGTGTCCTGCGCGATA ATCCACGGCCGATCGAATCGTCTGAACCCCGGCCGCATGGTCTGCGGGCCCTCGGGCATTCCTACGCCGAGCTGTGGCGC AGCGTGGTGAGGATTTGGCACGTCAGCCGTAACACGATCATTTTCCTTATCGCTTCCGCCTTGTTCCGCGACGGGCTCAA CGGCGTTTTCCAATTCGGTGGGCCACTCGCTCGTCAAACCTTTGGATTCAGTGCGTCAGGTGTACTCATCTTCGGTATTG TGGCCAACCTTATCGCCGGAATTTCCACAATCTTGCTGGGGCGCCTGGATGATCGCATCGGTCCGAAGCGACTCATCATT TTTTCACTGATCGTGTTGTCAGCGTGCGGTATGGGTGTTTTCATCGGCCACGCTGGTTCTGCCATGGTGTTTTGGGTGCT CGGCCTCATCATGTGTGGTTTCGTCGGACCGGCTCAGTCCGCGTCGCGGAGCCTCCTCACTCAGATCTGCCCGCCCGGGT ACCAGGGAGAGGTCTTCGGTCTCTACGCGACCACTGGCAAAGCCGTCTCGTTCCTGGCACCGGCACTATTTGGCCTCTTT GTCACGGTGGGCCATGCCATCACCGGTGGTGACAACAACCAGTACTGGGGAATCATGGGCATCGTCCTCGTGCTATTGGC GGGGTTGGCGGCCACGATTCCGGTCAGCACTGCTGAGATCCGCGGCAAGACTCATACGAATTAG
Upstream 100 bases:
>100_bases GTGACGGTCCTACTGGGAGCTTTCTGGGCCCCCATTGTGCTGGGATGAGGTTCGACGAGGCGCGATCGTGGTTCGTTAGG CACCGGTAGACTCAACAGCC
Downstream 100 bases:
>100_bases CCCTCAGCAACCCGATTGACGTGCGTAGTGACGTTATATTTCGACGACGACCCGGTTGATGCCGAACAGATGGGATCAGA CTCCTCTAGCAGCCAGTCCG
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMTLAGLTIALLAPVVGQWAGRR GRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGIGTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGG IIALLVIYIAWIKPKVGWFGVTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAGISTILLGRLDDRIGPKRLII FSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQSASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLF VTVGHAITGGDNNQYWGIMGIVLVLLAGLAATIPVSTAEIRGKTHTN
Sequences:
>Translated_447_residues MSHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMTLAGLTIALLAPVVGQWAGRR GRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGIGTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGG IIALLVIYIAWIKPKVGWFGVTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAGISTILLGRLDDRIGPKRLII FSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQSASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLF VTVGHAITGGDNNQYWGIMGIVLVLLAGLAATIPVSTAEIRGKTHTN >Mature_446_residues SHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMTLAGLTIALLAPVVGQWAGRRG RQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGIGTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGGI IALLVIYIAWIKPKVGWFGVTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWRS VVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAGISTILLGRLDDRIGPKRLIIF SLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQSASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLFV TVGHAITGGDNNQYWGIMGIVLVLLAGLAATIPVSTAEIRGKTHTN
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47960; Mature: 47829
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMT CCCCCCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH LAGLTIALLAPVVGQWAGRRGRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGI HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH GTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGGIIALLVIYIAWIKPKVGWFG HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAG HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHH ISTILLGRLDDRIGPKRLIIFSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHH ASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLFVTVGHAITGGDNNQYWGIMG HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH IVLVLLAGLAATIPVSTAEIRGKTHTN HHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure SHTDVPADQRKRVFAWAMWDPGTQPFASVITTFVFAVYLVGDAFGSKDRTVTALSWTMT CCCCCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH LAGLTIALLAPVVGQWAGRRGRQVTALKWLTWTLAVMSGLLFFVKPHPSYLVFGLVLLGI HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH GTVISDVGSSLYNGMLDDVAESGKVGRISGLGWGMGYLGGIIALLVIYIAWIKPKVGWFG HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VTNHEGMNIRVAMLFCAVWILALTLPTFCVLRDNPRPIESSEPRPHGLRALGHSYAELWR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH SVVRIWHVSRNTIIFLIASALFRDGLNGVFQFGGPLARQTFGFSASGVLIFGIVANLIAG HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHH ISTILLGRLDDRIGPKRLIIFSLIVLSACGMGVFIGHAGSAMVFWVLGLIMCGFVGPAQS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHH ASRSLLTQICPPGYQGEVFGLYATTGKAVSFLAPALFGLFVTVGHAITGGDNNQYWGIMG HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH IVLVLLAGLAATIPVSTAEIRGKTHTN HHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]