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The map label for this gene is 50842511

Identifier: 50842511

GI number: 50842511

Start: 1114866

End: 1115720

Strand: Direct

Name: 50842511

Synonym: PPA1028

Alternate gene names: NA

Gene position: 1114866-1115720 (Clockwise)

Preceding gene: 50842510

Following gene: 50842512

Centisome position: 43.54

GC content: 62.22

Gene sequence:

>855_bases
ATGACTGACGACCGAACCTCATCGAAGGCTCAACGCACTGTCATCATCGTCGGAGTCGATGGCTCCGAGGACGGCCTACG
TGCCGCCCGTTACGCCGCAGGATCAGCGATCAAGAGAGATGCTGATCTTATTGTCCTTCACGCCGTTGATGACGCTGCCG
TTGCGGGCGCCTGGGGAGTCGTCTATGACCCGACCGCTCTGCAGGATGCCGGTCAGGTCGTTGTTGATGACGCCATCCAT
GTTGCGACTGAGCGGGGGATGGACCCCGATCGGATCTCTGGAGAGGTCGTCTTGGGTAACCCGGCGGCCATTCTGGCCGA
TCGCAGCGCCGATGCCCAGCTCGTTGTGCTCGGCCGTCGCGCTACCTCGGGTCTGGAGCGTATGTTCGTCGGGTCGACAT
CTGTGGCTGTGGCGGGCATGTCGGCAGCGCCCGTCGTGGTCATCTCCCGCGCTTCGACCCCGGATCCGACTGGTGGCAAG
AAATGTGTTGCGGTCGCGGTCGGCCCCCAGAGCGTAGGAACTGCAGCTGTCGGATTCGGATTCGCTGAAGCTGACCACCG
TGGCTGCAAGCTGCTCGCAGTGACGGTTCCTGGTAACGACTCCGAAGAGGTGCACGACGAGGCCCTCAAACGACTCAACG
AGGTCGTCAAGCCGCTCGCTAATAAGCATCCCCATGTCGAGGTCGAGACCCGCGTGCTGTCCGGAGAACCCGTCGACGCC
TTAGTCGACCTCTCGGGCAACGTTGACCTCCTCGTGATTGGTATGAAGAAGCACCCGATTTTGGGCTGGACCGCAGGTGG
TGTCAGTCGCGGCATCATGGCGCACGCTCAGTCGCCGCTGGCTATCTGCCACTGA

Upstream 100 bases:

>100_bases
TTGAAGAGGGCTCCTGACCGGACCCCCTTTGTCTCAGGGCAAATGGTGGGACAATGTGACAAGGGCCAACGCTTTTGATG
TCTCACTGAGGAGGACCACC

Downstream 100 bases:

>100_bases
TATCGAGCTGCTGGCCTGCTGTTCTCGTCGCGTCGGCGGCTTCAGGACGCGTTCGCCTGCGTTTCACCGTCGTCTACAAC
ACCATGTACTGACGTTGAGG

Product: putative universal stress protein UspA

Products: NA

Alternate protein names: USP Rv2005c [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGVVYDPTALQDAGQVVVDDAIH
VATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRRATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGK
KCVAVAVGPQSVGTAAVGFGFAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA
LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH

Sequences:

>Translated_284_residues
MTDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGVVYDPTALQDAGQVVVDDAIH
VATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRRATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGK
KCVAVAVGPQSVGTAAVGFGFAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA
LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH
>Mature_283_residues
TDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGVVYDPTALQDAGQVVVDDAIHV
ATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRRATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGKK
CVAVAVGPQSVGTAAVGFGFAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDAL
VDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 29219; Mature: 29087

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGV
CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCE
VYDPTALQDAGQVVVDDAIHVATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRR
EECCHHHHCCCCEEEECHHHHHHHCCCCHHHCCCEEEECCCEEEEEECCCCCEEEEEECC
ATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGKKCVAVAVGPQSVGTAAVGFG
CCCCHHHEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHCCC
FAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEE
LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH
EEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
TDDRTSSKAQRTVIIVGVDGSEDGLRAARYAAGSAIKRDADLIVLHAVDDAAVAGAWGV
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCE
VYDPTALQDAGQVVVDDAIHVATERGMDPDRISGEVVLGNPAAILADRSADAQLVVLGRR
EECCHHHHCCCCEEEECHHHHHHHCCCCHHHCCCEEEECCCEEEEEECCCCCEEEEEECC
ATSGLERMFVGSTSVAVAGMSAAPVVVISRASTPDPTGGKKCVAVAVGPQSVGTAAVGFG
CCCCHHHEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHCCC
FAEADHRGCKLLAVTVPGNDSEEVHDEALKRLNEVVKPLANKHPHVEVETRVLSGEPVDA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEE
LVDLSGNVDLLVIGMKKHPILGWTAGGVSRGIMAHAQSPLAICH
EEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]