Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842510

Identifier: 50842510

GI number: 50842510

Start: 1113850

End: 1114782

Strand: Direct

Name: 50842510

Synonym: PPA1027

Alternate gene names: NA

Gene position: 1113850-1114782 (Clockwise)

Preceding gene: 50842509

Following gene: 50842511

Centisome position: 43.51

GC content: 57.98

Gene sequence:

>933_bases
ATGGACGAGCCACCAGACTTTGCGTTCGATCTGGATCGCAGCACAGCGCAGGCGTGGGACCAGTTCGCCGAGCGTCTGGC
GGAGGTCGTCTCTGTCATTGACGACGACGGCGAACTAACGATCTCAACCCTGTCCGCGCGCACCGACACGGCTCCCTTTA
TACGCTTCGTGCAAGATGATCCTGGTTGCAGCGACGATACCGCGATGATTCTTGCCGAAGCATCCAGCAATAACTGTTTA
CCGGAGAGTGCATGCCTTACGTCGGGCCAGCTTGACGGCCTGAGATCCCTAGGATGGCAGGCCCCTGGAACCTGCAAGGT
CCACCAAACCGATAACTACTGGGTGTACCGCAGTCAGGACGATTCTGAGCAACTTGCCGAATTGACAGTAACGACTTTGC
GTGACATTTTCGGTGTTCCCCATCCAGTGTTTCTGGCCCCCGACCAGCTTGCGGAGATTTTGCAGCCTGAGCCCCCGTTG
TCGCCTACAGAGGCGGCTAGCGTCCCCGCCATCATGCCGGTAGACAAAGATCACCTCGACCGTCTCGTTGCTGATGAGTT
GTCCCACATGTTTGGCCATCCGGCCATCCGCGATAGCGAGGGCGACTTTGCTATCCGAGTAGGGACGTGCATGGTCTTCG
TACGTACCACCCCCGATGCCTCGGAATTGTTGCTTTTTGCTGCTCTCGTCCATGACGTTGAGGGGCGTTCTCGTGCCGTT
GAGGTACTCAATGACCTCAATGTGCAATCCCGCTACGGGCGTTTCGCCCTTCATCAAGATCGAGTGTTCGTGACGATGTC
GGTGATGGCCCGCCCTTTCGTCGCCGCGCATCTTCACCAGGCCGTCTCCATCATGTCCCGACTGGCCGATGGGCTGGACA
ACGAATTGGCCCGCAAACTGCGGGGGAGAACCACTTTTGAAGAGGGCTCCTGA

Upstream 100 bases:

>100_bases
TGTGGTCCATAACGGCTGCCAGAGGCTGATAGCTATGCGTTGGATGGCAGGATCGTGAGAGGCAGCTGCAGATAGCGGCG
CGACCTACTAGGTTGGAACC

Downstream 100 bases:

>100_bases
CCGGACCCCCTTTGTCTCAGGGCAAATGGTGGGACAATGTGACAAGGGCCAACGCTTTTGATGTCTCACTGAGGAGGACC
ACCATGACTGACGACCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDDPGCSDDTAMILAEASSNNCL
PESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQDDSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPL
SPTEAASVPAIMPVDKDHLDRLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV
EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKLRGRTTFEEGS

Sequences:

>Translated_310_residues
MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDDPGCSDDTAMILAEASSNNCL
PESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQDDSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPL
SPTEAASVPAIMPVDKDHLDRLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV
EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKLRGRTTFEEGS
>Mature_310_residues
MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDDPGCSDDTAMILAEASSNNCL
PESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQDDSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPL
SPTEAASVPAIMPVDKDHLDRLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV
EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKLRGRTTFEEGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34143; Mature: 34143

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDD
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEECCC
PGCSDDTAMILAEASSNNCLPESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQD
CCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHCCCCCCCEEEEEECCCEEEEECCC
DSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPLSPTEAASVPAIMPVDKDHLD
CHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHH
RLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKL
HHHHHCCHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RGRTTFEEGS
HCCCCCCCCC
>Mature Secondary Structure
MDEPPDFAFDLDRSTAQAWDQFAERLAEVVSVIDDDGELTISTLSARTDTAPFIRFVQDD
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEECCC
PGCSDDTAMILAEASSNNCLPESACLTSGQLDGLRSLGWQAPGTCKVHQTDNYWVYRSQD
CCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHCCCCCCCEEEEEECCCEEEEECCC
DSEQLAELTVTTLRDIFGVPHPVFLAPDQLAEILQPEPPLSPTEAASVPAIMPVDKDHLD
CHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHH
RLVADELSHMFGHPAIRDSEGDFAIRVGTCMVFVRTTPDASELLLFAALVHDVEGRSRAV
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
EVLNDLNVQSRYGRFALHQDRVFVTMSVMARPFVAAHLHQAVSIMSRLADGLDNELARKL
HHHHHCCHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RGRTTFEEGS
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA