| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is hflX [H]
Identifier: 50842504
GI number: 50842504
Start: 1105133
End: 1106584
Strand: Direct
Name: hflX [H]
Synonym: PPA1021
Alternate gene names: 50842504
Gene position: 1105133-1106584 (Clockwise)
Preceding gene: 50842503
Following gene: 50842505
Centisome position: 43.16
GC content: 57.16
Gene sequence:
>1452_bases GTGAGCGAGATCGAACAAATCGATAACGAGCGCGAAGACGCGCTGAAGAACAACAACGGTTTTAGCGAGGATCAGAGTGA CTACGACGGTGACCAATTTGATCTGGATGCACGCCTATCGCTGACACGCGTGCCAGGTATGTCAACTGATCTGTCGGATA TTTCCGAGGTTGAGTACCGTCAACTGAGGCTGGAACGAGTGGTGCTGTGTTCGGTGTGGACTCAGGGAACTGCCGCAGAC GCCGAGAACGCTATGGCGGAGCTGAAAGCCCTTGCTGAAACGGCGGGATCTCAGGTACTCGAAGCTGTCATGCAACATCG GACTACCCCGGATCCGGCGACGTACATTGGTTCGGGCAAGGTGGCAGAGCTTGCCGAGGTGGTGTGGGCGACTGGCGCCG ATACTGTCATTTGTGATGGTGAACTTGACGCCGCTCAGTTGCGCAACCTCGAGGATCGGGTCAAGGTCAAAGTTGTGGAC CGGACGGCCCTGATTCTCGACATATTCGCTCAACATGCGCGCAGCGTTGAGGGTCGTACTCAGGTGGAGCTGGCCCAGCT TAATTATCTCAAGCAGAGATTGCGTGGTTGGGGCGGCAATCTCTCGCGTCAGACTGGTGGACGAGCCGCCGGAGGTGCTG GTATCGGTGGTCGTGGTCCCGGTGAGACCCGTATCGAGACTGACCGTCGACGTATTAGCCATCGGATTGCGGTGTTGCGT CGTCGTCTCACGCACATCGAGTCCACCCGTGCCTCCAAACGGGCCGATCGCATCCGAAACAAGGTGCCATCAGTGGCCAT CGTCGGGTACACCAACGCTGGTAAGTCTTCCTTGCTCAACAGGCTTACCCGCGCCGGGGTACTCGTCGAGAATGCTCTGT TTGCAACCCTTGACCCCACGACTCGACGCGCCACCACCTCCGACGGTCGGGTCTACACCCTCACTGACACGGTGGGATTT GTTCGACACTTGCCGCACGACCTCGTCGAGGCCTTTGCATCTACTCTGGAGGAGACGGCGATGGCCGATGTGCTCCTCCA CGTTGTGGATGCAGATGATCCAGATCCACTCGGCCAGGTCGACGCAGTACGCGGGGTGCTGTCGGGGATTGGGGCCAGTA ATATTCCTGAGATTCTCGTCCTTAACAAGATTGATCGTCTTAGCGATGAAACCATCTTGACCTTGCGCTCTACCTTCCCG GGGGCTTACTTAGTCTCTGCTCATACAGGTGAAGGAATCGATAAGCTTGTCGAGGCCATCGAGGCCGGACTTCCCATACC TTCCCAGCGCGTCGACGTCGTTATTCCTTATGCGCGTGGGGATCTTATGGACAAGATTCACCACAACGGAACTATCGGAC TCATTGATCACACTGCTGATGGCACTCATGTCGTCGCTCACCTTCACCCTGCTCTAGCGGCCGAGGTCGAAGAGGCTTGT GATGGGGTCTGA
Upstream 100 bases:
>100_bases TCTGCCGAATGGATGAGAGGGCGAACACGCTCTTGTCAACCTGTCGGAACGTCCTCCTACACTTAGCGCGATGGCATTGG GGCGTGAGGATGGGTACCGG
Downstream 100 bases:
>100_bases GCCGGCAGACGTCAGTCAGATGTGTCGTGACCTGCTCAGCACTGCCGTCTCTGAGATGGGTGGTCAAGAGAGGCCGGGCC AAGTCGCGATGGCTAAAGCT
Product: GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTDLSDISEVEYRQLRLERVVLCSVWTQGTAAD AENAMAELKALAETAGSQVLEAVMQHRTTPDPATYIGSGKVAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVD RTALILDIFAQHARSVEGRTQVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRRRISHRIAVLR RRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDGRVYTLTDTVGF VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFP GAYLVSAHTGEGIDKLVEAIEAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHPALAAEVEEAC DGV
Sequences:
>Translated_483_residues MSEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTDLSDISEVEYRQLRLERVVLCSVWTQGTAAD AENAMAELKALAETAGSQVLEAVMQHRTTPDPATYIGSGKVAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVD RTALILDIFAQHARSVEGRTQVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRRRISHRIAVLR RRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDGRVYTLTDTVGF VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFP GAYLVSAHTGEGIDKLVEAIEAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHPALAAEVEEAC DGV >Mature_482_residues SEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTDLSDISEVEYRQLRLERVVLCSVWTQGTAADA ENAMAELKALAETAGSQVLEAVMQHRTTPDPATYIGSGKVAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVDR TALILDIFAQHARSVEGRTQVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRRRISHRIAVLRR RLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDGRVYTLTDTVGFV RHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFPG AYLVSAHTGEGIDKLVEAIEAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHPALAAEVEEACD GV
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=213, Percent_Identity=32.8638497652582, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI310124267, Length=213, Percent_Identity=32.8638497652582, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI310124171, Length=213, Percent_Identity=32.8638497652582, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI310124169, Length=213, Percent_Identity=32.8638497652582, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI310133116, Length=221, Percent_Identity=32.579185520362, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI310133118, Length=237, Percent_Identity=32.4894514767932, Blast_Score=104, Evalue=2e-22, Organism=Escherichia coli, GI1790615, Length=388, Percent_Identity=45.8762886597938, Blast_Score=297, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17561038, Length=342, Percent_Identity=30.7017543859649, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24650079, Length=399, Percent_Identity=29.8245614035088, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52299; Mature: 52168
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTDLSDISEVEYR CCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH QLRLERVVLCSVWTQGTAADAENAMAELKALAETAGSQVLEAVMQHRTTPDPATYIGSGK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC VAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVDRTALILDIFAQHARSVEGRT HHHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHEEEEEECHHHHHHHHHHHHHHCCCCCH QVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRRRISHRIAVLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEECCC TRRATTSDGRVYTLTDTVGFVRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQV CCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFPGAYLVSAHTGEGIDKLVEAI HHHHHHHHHCCCCCCCCEEEEHHHHHCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHH EAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHPALAAEVEEAC HCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHH DGV CCC >Mature Secondary Structure SEIEQIDNEREDALKNNNGFSEDQSDYDGDQFDLDARLSLTRVPGMSTDLSDISEVEYR CHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH QLRLERVVLCSVWTQGTAADAENAMAELKALAETAGSQVLEAVMQHRTTPDPATYIGSGK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC VAELAEVVWATGADTVICDGELDAAQLRNLEDRVKVKVVDRTALILDIFAQHARSVEGRT HHHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHEEEEEECHHHHHHHHHHHHHHCCCCCH QVELAQLNYLKQRLRGWGGNLSRQTGGRAAGGAGIGGRGPGETRIETDRRRISHRIAVLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RRLTHIESTRASKRADRIRNKVPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEECCC TRRATTSDGRVYTLTDTVGFVRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQV CCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DAVRGVLSGIGASNIPEILVLNKIDRLSDETILTLRSTFPGAYLVSAHTGEGIDKLVEAI HHHHHHHHHCCCCCCCCEEEEHHHHHCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHH EAGLPIPSQRVDVVIPYARGDLMDKIHHNGTIGLIDHTADGTHVVAHLHPALAAEVEEAC HCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHH DGV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]