| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842475
Identifier: 50842475
GI number: 50842475
Start: 1076302
End: 1076706
Strand: Direct
Name: 50842475
Synonym: PPA0991
Alternate gene names: NA
Gene position: 1076302-1076706 (Clockwise)
Preceding gene: 50842474
Following gene: 50842478
Centisome position: 42.04
GC content: 59.26
Gene sequence:
>405_bases GTGGGAAGCGGCAGCGATTTGGACAAGCTCGGTTTCGAGGCCGGGCAGGTCGTCCAGGAGCTCGGTTGGGACGATGACGT TGACGAGGACCTCCGTCAAGAGGTTATGGACATCATCGACGGTGACATGATTGAAGATTCGATCGACGCCGTTGACATCG TCTGGTTGTGGTTGCGTGCCGATGACGGTGATGTAGCCGACAGCTTGGTTGATGCTATGCGTGATTTGTCTGACGACGGG TTCATCGTCCTCGTCACCCCGAAGGTGGGACGCCCGGGCACTATCGATCCGGCTGATCTGTCTGACGGCACAGACACCGC TGGAATGGTGCTGACCACCAGCTACGACGTTAGTAAGGACTGGCAAGCCCACAAAATTGTGCGCCCGCGCGGCGGGCGGC GCTGA
Upstream 100 bases:
>100_bases CGAAGAAAAGGCCCCACGGTGGTCGTCGGCGGGATGTTCTGGCACACTGATGAAGGTGAGAACTTCCTGTCACGCAGAGC AAGGGAAAGCGAAGGATTTC
Downstream 100 bases:
>100_bases CCCGTCTTCTTTCATATGCTGCCTACGGCATAGCTCCGTAGGGGGTGCGGCAGGATGTCCCAGTAGGACAGGTCGCGCCG GGTCAGCGCGACGGTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDMIEDSIDAVDIVWLWLRADDGDVADSLVDAMRDLSDDG FIVLVTPKVGRPGTIDPADLSDGTDTAGMVLTTSYDVSKDWQAHKIVRPRGGRR
Sequences:
>Translated_134_residues MGSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDMIEDSIDAVDIVWLWLRADDGDVADSLVDAMRDLSDDG FIVLVTPKVGRPGTIDPADLSDGTDTAGMVLTTSYDVSKDWQAHKIVRPRGGRR >Mature_133_residues GSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDMIEDSIDAVDIVWLWLRADDGDVADSLVDAMRDLSDDGF IVLVTPKVGRPGTIDPADLSDGTDTAGMVLTTSYDVSKDWQAHKIVRPRGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021412 [H]
Pfam domain/function: PF11253 DUF3052 [H]
EC number: NA
Molecular weight: Translated: 14638; Mature: 14507
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDMIEDSIDAVDIVWLWLRA CCCCCCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEEEEEEC DDGDVADSLVDAMRDLSDDGFIVLVTPKVGRPGTIDPADLSDGTDTAGMVLTTSYDVSKD CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC WQAHKIVRPRGGRR CCCCEEECCCCCCC >Mature Secondary Structure GSGSDLDKLGFEAGQVVQELGWDDDVDEDLRQEVMDIIDGDMIEDSIDAVDIVWLWLRA CCCCCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEEEEEEC DDGDVADSLVDAMRDLSDDGFIVLVTPKVGRPGTIDPADLSDGTDTAGMVLTTSYDVSKD CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC WQAHKIVRPRGGRR CCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]